Hibiscus syriacus (Rose-of-Sharon): 120119496
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Entry
120119496 CDS
T09559
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120119496
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
120119496
Transfer RNA biogenesis [BR:
hsyr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120119496
Prokaryotic type
120119496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
120119496
NCBI-ProteinID:
XP_038995240
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MDTSDTPVTKITSSPPQLQEPVPKKPKMSTTATSDDEEAAASATGTKKQRYKRRKIAIFF
AYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRGNPKRYDWARSARTDKGVSAVG
QVVSGRFYIDPPGLVERLNQMLPTQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDP
SCHRDRESVMASLGSGNELVKCLECSERGRKVIGIMGKRSPESKSTLVQFGISSNSGDAE
NVVKEDNLISELKEEVTEVDDSGVAEDKVNVVKSTVVRSDISSNIGDAENAIKVDNLTSE
FKEKVTKMDDSGVLEDKVDVEQKVDRGFCYGKEEQERFNRILNHYVGSHNFHNFTTRTKA
EDPAARRYIVSFHANKVVTVKGIDFVKCEVVGQSFMLHQIRKMIGVAVAVMRNCAPESLI
ETALRKDVCINVPTAPEVGLYLDDCFFSSYNQKWKDSHEELSMKDYEEEAEEFKMKFIYS
HIGSTEREEGTVALWLHSLNDRNYPDLQACSRDTIEGKKSPKVDDGVDIVEDQSNTVEKN
GDSAEIKV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcagatacccccgtcaccaaaattacttcatcgccgccacagctgcaggaa
cctgtccctaaaaagcccaaaatgtctaccaccgcaacgtccgacgacgaagaagccgcc
gcatcggcaaccggcaccaagaaacagagatacaaacgccgcaaaatcgccattttcttt
gcctactgcggtgtcgggtatcaaggaatgcaaaaaaacccaggagccaaaaccatcgaa
ggtgacctcgaagaagcgctattccacgccggcgccgtccccgagcaggatcgtggcaac
cccaaacgttacgactgggctcggtcggcccgaaccgataagggcgtaagcgctgttggt
caggtcgtttctgggcggttttacattgacccgcctggcctcgtggaacgccttaatcag
atgcttccaacccagattcggatattcgggtataagcgtgtgacagcctcttttaatgca
aagaagttttgtgatcgacggcggtatgtttatcttatccctgtttttgctcttgatcct
agttgtcatcgagatagggaaagtgttatggctagtttagggtccggtaatgagctcgtg
aaatgcttggaatgttctgaaagaggtcgtaaagtcataggcatcatgggcaagcgtagt
cctgaatccaagtcgactttggttcagttcggcatttcgtcgaacagtggagatgcagaa
aatgttgttaaggaagataacctgatatctgaacttaaagaggaggttactgaagtggat
gattcaggggttgcggaagataaagttaatgtagtcaagtcaacagtagttcggtctgac
atttcatcgaacattggagatgcagaaaatgcaattaaggtagataacctgacttctgaa
tttaaggaaaaggttaccaaaatggatgattctggggttttggaagataaagttgatgta
gaacagaaagtggatagaggtttttgttacggtaaggaagaacaggagagattcaataga
atattgaatcactatgtcgggtctcacaacttccataactttactacaagaacaaaagcc
gaagaccctgctgcacgtcgctatattgtttcatttcacgcgaacaaggttgttactgtc
aagggcattgattttgtcaagtgtgaggttgtgggacagagcttcatgcttcatcagatt
cgaaagatgatcggtgtggctgttgctgtcatgaggaattgtgctcccgagtctctcatt
gaaactgcattgcgaaaggatgtatgcatcaatgtacctacggcacccgaggttggtttg
tacttggacgattgcttcttttcttcttataaccaaaaatggaaagatagtcatgaagag
ttgtccatgaaagactatgaagaagaggcagaggaattcaaaatgaaatttatatactct
catatcggctccacggagcgcgaggaaggaactgtggccctatggttgcattctctaaac
gacagaaactatcccgatttacaggcctgcagcagagacacaatcgagggtaagaagagt
cctaaggttgatgatggtgtagacatcgttgaagaccaaagtaacacggtggagaaaaac
ggagactctgctgagattaaagtgtga
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