Hibiscus syriacus (Rose-of-Sharon): 120119536
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Entry
120119536 CDS
T09559
Name
(RefSeq) oligouridylate-binding protein 1B-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120119536
03041 Spliceosome [BR:
hsyr03041
]
120119536
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120119536
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120119536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
120119536
NCBI-ProteinID:
XP_038995277
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MQYQRLKQQQQQQALMQQALLQQQSLYHPGILAPPQIEPIPSGNLPPGFDPSTCRSVYVG
NIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQ
PIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYPGCSDARVMWDQKTGRS
RGFGFVSFRNQQDAQSAINDLSGKWLGSRQIRCNWATKGVGTSDDKQSSDARSVVELTNG
SSALDAEDGKETTTNNEAPENNPQYTTVYVGNLAPEVTQHELHFHFHALGAGVIDEVRVQ
RDKDFGFVRYSTHAEAALAIQLGNAHSFLCGKQIKCSWGSKPTPPGTASNPLPPPAATLL
AGLSATDLLAYEQQLGMNKMSGVHALMHPQGQHPLKQATMALGAAGASQAIYDGGFQNVV
AAQQLMYYQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcagtaccagaggctgaagcaacagcaacagcaacaagccttgatgcaacaagctctc
ctccaacaacagtctctctatcacccaggcatcttagctcctccacagatagagccaatc
ccaagtggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtatgtggga
aacatccatactcaagtgactgaaccactactccaagaagtttttgcaagtactggtccg
gttgaaggttgcaagcttattagaaaggaaaagtcatcatatggatttatccactacttc
gatcgtagatcagctgctcttgctattttatctctaaatggaaggcatttatttggacag
cctatcaaggtcaattgggcatatgctagtggtcagagagaggatacgtcgggtcacttt
aacatttttgttggggatctcagtcctgaggttactgatgcaatgctgtttgcgtgcttt
tctgtttatcccggttgttcggatgcgcgggttatgtgggatcagaaaactggacgttca
agaggatttgggtttgtttcatttcgtaaccagcaggatgcacaaagtgcaattaatgat
ttaagtggaaagtggcttggtagtcgacagattcgttgtaactgggcaacgaagggtgtt
ggtaccagtgatgacaagcagagctctgatgctagaagtgtggtagagctaaccaatggc
tcatcagcattggatgcagaggatggtaaagagacaacaaccaacaacgaggctcctgag
aataatcctcaatatactactgtttacgtcggcaatcttgctcccgaggtcacccaacat
gaactccactttcactttcatgctcttggtgctggggtgattgatgaggttcgagtccag
cgtgataaagactttggctttgtgagatacagtactcatgctgaggcagctttggctatt
caactggggaatgcccattcgtttttatgtggcaagcaaattaagtgctcatggggcagc
aaacctacaccacccgggacagcttcaaatccacttcctcctcctgctgccacactgtta
gccgggctttcagccaccgaccttttagcctacgagcagcaacttggcatgaacaaaatg
agtggtgtgcacgccctaatgcacccccaggggcagcaccctctgaagcaagcaacgatg
gcactaggtgccgctggagcaagccaggccatatatgatggcgggttccagaacgttgtg
gctgcccagcagctaatgtactatcagtaa
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