Hibiscus syriacus (Rose-of-Sharon): 120119656
Help
Entry
120119656 CDS
T09559
Name
(RefSeq) flowering time control protein FY-like
KO
K15542
polyadenylation factor subunit 2
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120119656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120119656
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120119656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
DSE1_N
ASA1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_Aladin
CFAP251_N
Beta-prop_WDR41
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
PAC11
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_Vps41
WD40_like
Beta-prop_RIG_1st
WD_LRWD1
Pep3_Vps18
WDR54
Motif
Other DBs
NCBI-GeneID:
120119656
NCBI-ProteinID:
XP_038995391
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MMYGDPQQQQNQPPLPQGGEFPRGPPPSLPQMMRQPSASSTTLNSEYHHPGHPPQIPPYE
AHGDNFAAKRMRKMTQRRAVDYTSTVVRYMQVRTWQQNLMDRTTLQPTPASAIDMLPTAA
YLDNPSSSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMIL
QAHDQAIRSMVWSHNNNWMVSGDDGGTIKYWQNNMNNIKINKSSHKESVRDLSFCRTDLK
FCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTG
RELCSFHGHKNTVLRVKWNQNGNWVLTAGKDQIIKLYDIRAMKELESFRGHRKDVTALAW
HPFHEEYFVSGSFGGSIFHWVVGCETPQVEIPNAHDNSVWDIAWHPIGYLLCSGSNDHMT
KFWCRNRPGDTARDKYNMGQNQGYGEQNPALVARMPGNFAVPEGPTTPGPFAPGLTQNEG
TIPGIGVAMSLDGSSQGDQKQPLPGSMPFGAPPLPPGPHPSLLAGNQQHGYQQTPQQIQQ
QSLQQQMPPRPIVPPNMSQLQPGSHRPMLPHPHLQRPQPQMPPHVVPSPGPSSIPRSLPS
HSSHQMPMPGPMGVQGTMNQMPPPMPQGHFRGINPMHPRSLPNSGAPSVGGFPNGMQNMQ
GQANVGGGQMYPQGGGAFNRGQGGQMPMMPGFNPYQSGGQSGMLPPPQSSGHPPHGQLPP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacggtgatccacaacagcagcagaaccagccgccgctgccgcaaggtggggaa
ttcccgagaggtcctcctccatcgcttccgcaaatgatgcggcagccctctgcttcttcc
actactcttaactcagagtatcaccaccctggtcatcctcctcagattcctccttatgag
gctcatggtgataattttgccgccaaaagaatgagaaagatgacccaaaggagggctgtc
gattatacgagcactgttgtgcgatatatgcaggttcgtacgtggcagcagaacttaatg
gacaggacaacattgcagcctactccagcatcagcaatcgatatgttgcctacagctgcc
tatttagataatccgtcctcaagttttgctgctaaatttgtccatacatctctaaataaa
aaccggtgttcaattaatcgtgttttgtggactcccactggtagacgtctcatcacgggt
tctcaaagtggagaatttactttatggaatggacaatcatttaattttgaaatgatcctt
caggcccatgatcaagccatcagatctatggtctggagtcacaataacaactggatggtt
tctggtgatgatgggggcacaataaagtattggcagaataacatgaataatattaagatc
aataaatcttctcacaaagaatcagttcgtgacttaagtttttgtaggacagatttaaag
ttttgttcatgttctgacgatactactgtaaaagtctgggactttgcccggtgccaggag
gagcgttcgttaactggccatggttgggatgtcaaaagtgtagattggcaccctacaaaa
tccttattggtttcaggcggaaaagacaaccttgtgaagctttgggatgctaagacaggg
agagagctttgctcttttcatggccacaaaaatacagtacttcgtgtcaaatggaatcaa
aatggtaactgggtgttgactgctggaaaggatcagatcataaagctttatgatatcaga
gctatgaaggaacttgaatctttccgaggccacaggaaggatgtgactgcattggcttgg
cacccgttccatgaagaatattttgtcagtgggagttttggtggatccattttccattgg
gttgttgggtgtgaaactccacaggtggaaattcctaatgcacatgataatagcgtatgg
gatattgcttggcatcctattggatatcttctatgcagtggtagcaatgatcacatgaca
aagttttggtgcagaaatagaccaggagatactgctcgtgataaatataacatgggacag
aaccaaggatatggtgagcaaaacccagcactagttgctcgtatgcctggtaattttgct
gtgcctgaaggcccaacaactccaggaccatttgcacctggattgactcaaaatgagggt
acaatacctggtattggagttgcgatgtctcttgatgggtcttctcaaggagaccaaaag
cagcctcttccaggttccatgccttttggagctcctcctcttcctcctggaccacatcca
tctcttcttgcaggcaatcagcagcatggatatcaacaaacccctcaacagattcaacaa
cagtcactacaacagcaaatgcctcctaggcctattgtacctccgaatatgtcacagcta
cagcctggatctcataggcccatgcttccacatcctcatttacaacgccctcaaccacaa
atgcctccccatgttgttccttcacctggaccatcatcaattccaagatctttgccttca
cattcatcacatcaaatgccaatgcctggtccaatgggtgtgcaaggtacaatgaatcag
atgcctcctccgatgccccaaggccattttagggggattaatccaatgcacccgagatcc
ttaccaaatagtggtgccccttcagttggaggttttccaaatggtatgcaaaatatgcag
ggccaagcaaatgtgggtggggggcaaatgtatccccagggtggaggagcattcaatcgc
ggacagggtgggcagatgccaatgatgccagggttcaatccttaccagtcaggtggtcaa
tctggtatgctgcctccaccacaatcatcaggtcatccaccgcacggccaactgcctcca
taa
DBGET
integrated database retrieval system
