Hibiscus syriacus (Rose-of-Sharon): 120119670
Help
Entry
120119670 CDS
T09559
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120119670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120119670
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120119670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
DUF8567
Motif
Other DBs
NCBI-GeneID:
120119670
NCBI-ProteinID:
XP_038995405
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MEPPLPVLPTNYGISNEFCSTGCKRTKLSSDSKDYDSTFSAASFQDDDEKKKLKGSANVI
DYSDPFAYAKMLETFNSGGKYGSVTKDFEALITRNTQLVSKLLDLHPSLSSLVANVEKTP
RKEASKLPSRQLSHLSRNNFIDLEDDSVGNDTTTSSSPVVILDSDDEVNRNPRPLHPVQE
IVLRKPSGNLIYKEIMVGEPKLFQVGESMGTRPYRKEKISLTSEIDVKKDKGVYVGVEDD
VDTQTENEDDGLGDIWQEMSMALEFSKDAFEDPSCERMSEDDEDCDHSFVLKDDLGYVCR
ICGVIERGIETIIDIQYNKAKKSTHNYSLDARNGKNRESIETGVKFSEDDLAVTDITAHP
RHMKQMKPHQVEGFSFLLSNLVADNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHAKPL
VVLPKGILATWKKEFETWQVEDIPLLDFYTVKADNRYQQLEVLKKWVECKSILFLGYKQF
STIICEGGTNQTSKSCQEILLRAPSILILDEGHTPRNENTDVLQSLAKVQTARKVVLSGT
LYQNHVKEVFNILNLVRPKFLRLDTSKSVIKRIMSKVHIAGVKKQLKGGADAAFYDLVEH
TLQKDENFERKVSVIHDLREMTSKVLHYYKGDFLDELPGLVDFTIVLSLSPRQKDEVHKL
TRSEKRRFKISSVGSAVYLHPKLNSFSENSEMTDDKMDDLLDKVDVKEGVKAKFFLNMLN
LCESAGEKLLVFSQYLIPLKFLERLSVKMKGWQPGIQVFSITGESSSDHREWSMDRFNNS
PDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKKVYAYRLIA
GDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVDLNECNDLFLESQLLREDIRD
LYRR
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcccctgccggttttgccaacaaattacggaatctcaaacgaattctgttct
acaggttgtaaacggacaaaattatctagtgattcaaaagattatgacagcaccttctct
gctgcaagttttcaagatgatgatgaaaagaagaaacttaagggctcagcaaatgttatt
gattatagcgacccatttgcatatgctaaaatgcttgaaacttttaattctggtggtaaa
tatggaagtgttacgaaagatttcgaagctcttattactagaaatacacaattggtaagc
aagctacttgatttgcatccttctctttcaagtttggtcgcaaatgtggaaaaaactcca
aggaaagaggcttcaaagctgccaagccgacaactttcgcatttgtcacggaataatttt
atcgatttggaggatgactctgttggaaatgacaccacaacatcatcgtcaccggtagtg
attctggattcagatgatgaagtcaatagaaatccaaggcctctacatcccgttcaggaa
attgtattgaggaagccatccgggaatttaatatataaggagataatggttggagagcct
aaattgtttcaggttggggagtctatgggaacccgaccttacaggaaagaaaagattagc
ctaaccagtgaaattgatgtcaagaaggataaaggtgtttatgttggtgttgaagatgat
gttgatactcaaactgagaatgaagatgatggtttgggagacatttggcaggagatgtca
atggcattagagttctcaaaggatgcatttgaggacccttcctgtgaacgcatgtcagaa
gatgatgaagactgcgatcattcttttgtcttgaaggatgatcttggttatgtgtgtaga
atttgtggggttatcgagagaggaattgagactataattgacatccaatataacaaggcc
aaaaagagtacacataattattcattagatgcacgaaatggcaaaaatagagagtcaatt
gaaacaggagttaaattttctgaagatgatttagcagtaactgacataactgctcatcca
aggcatatgaagcaaatgaaacctcatcaagtagaaggctttagttttcttctgagcaat
ttggtggcagataaccctgggggctgcatcctggcgcatgctcctggatctggaaaaaca
ttcatgataataagcttcatgcaaagtttcctagccaaatacccacatgctaaaccgcta
gttgtgcttccaaagggcatcttggctacatggaaaaaagagtttgagacatggcaagta
gaggatattccactgctcgatttttatactgtgaaagcagataatagatatcagcaattg
gaagttttgaagaagtgggttgaatgcaagagtatcctttttctgggatacaagcagttc
tctaccataatttgtgaaggtggaaccaaccaaacttctaaatcttgccaagagatactg
ctcagagcaccttcaattttaattttggatgaaggccacacaccaaggaatgagaacact
gatgtgttgcaatcccttgcaaaagtgcaaacagctcgaaaagtggtactttcagggact
ctttatcaaaatcacgtcaaagaggtatttaacatattgaaccttgttcgaccaaagttt
cttaggttggatacttcaaaatcagtaattaagcggataatgagcaaggtgcatatagct
ggagtgaagaagcagttaaaaggtggagctgatgcagctttttatgacttggtggagcac
acactgcagaaagatgaaaattttgagaggaaagtctccgtcatccatgatctacgtgag
atgaccagcaaagtccttcattattataaaggtgatttcttggatgagcttcctggacta
gtggatttcactattgtgctcagtcttagtcctagacagaaggatgaagtccataagtta
actaggtctgaaaaaaggaggttcaagatttcatctgttggcagtgctgtttatcttcat
ccaaaactaaattctttctctgagaattctgagatgacagacgataagatggatgacttg
ttagacaaagtagatgtcaaagagggagtcaaagcaaaattttttctgaacatgttaaat
ttatgtgaatcagctggtgagaaactccttgttttcagtcagtatctcattcccttgaaa
tttttagagagattgtctgtgaaaatgaagggttggcaaccaggaattcaggttttctca
atcacgggtgaatcgagttctgatcaccgggagtggtctatggatcgcttcaacaattct
cctgatgcaaaagttttctttggatctattaaggcatgtggagagggaatttctttggtt
ggggcatcccgaattatcatcttggatgtccatcttaatccgtctgtgacccgccaagca
ataggtcgtgcatttcgccctggccaaaagaagaaagtgtatgcgtatagattgattgcg
ggggattcccctgaagaggaggatcatagtacttgtttcaagaaggaattaattgcaaaa
atgtggtttgagtggaacaagtattgtggcaaccgagattttgatatggaaactgttgat
ttgaatgagtgcaatgatctctttttggaaagtcagttgttaagggaagatatcagggat
ctctacagaaggtag
DBGET
integrated database retrieval system
