Hibiscus syriacus (Rose-of-Sharon): 120119751
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Entry
120119751 CDS
T09559
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120119751
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120119751
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
120119751
NCBI-ProteinID:
XP_038995494
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MGFSKRFFSSFALLMLILFFVCFTVMASEDKTELNSRLGEENKLQSLKNSSMEEEWINEH
SVENPEEVASMVDMSIRNSTERRRLGYFSCGTGNPIDDCWRCDRRWYLRRKHLANCAIGF
GRNSIGGRDGRYYVVSNPGDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVIRLKQELIMN
SFKTIDGRGANVHIANGACITIQYVTNVIIHGIHIHDCKPTGNAMVRSSPSHYGWRTVAD
GDGISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVR
DKRMQATIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYL
APFNPFAKEVTKRVETGNKWRQWNWRSEGDLFLNGAYFTPSGSGSAASYARASSLGAKSS
SLVGTITSNAGALSCRHGFMC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggggttctctaagagattcttttcttcgtttgctttgctaatgcttattttgtttttc
gtttgtttcactgtcatggcctcagaagacaaaactgagctgaattcaaggctgggtgaa
gaaaacaagttacagagcttgaagaactcatcaatggaggaggagtggataaatgagcac
tcggttgagaatccagaggaagttgcttcaatggtggatatgagcataagaaacagtaca
gagaggaggagattgggatatttctcatgtggaacagggaacccgattgatgattgttgg
aggtgtgaccggcgttggtacctcaggcgaaagcacctagcaaactgtgctatcggcttt
ggacgcaattccataggtggccgtgatgggaggtactacgtggtaagtaacccaggggac
gatgaccccgtgaaccccaaaccgggcaccctccgccatgccgttatccaggaccggccg
ctgtggatcgtgttcaagcgtgacatggtgatcaggttgaagcaggagcttataatgaac
agttttaagaccatcgatggccgtggtgccaatgtgcatatcgccaatggggcttgcatc
accatccagtatgtcaccaatgttatcatccacggtatccacattcacgactgcaagccc
accggcaacgccatggttcgaagctccccatctcattatgggtggaggaccgttgccgat
ggggacggcatctcgatcttcgggtcaagccatatctggattgaccataactcactgtcc
aactgtgccgatggactcattgatgccataatgggttccactgcaattaccatatcaaac
aactacttcacccaccacaacgaggtcatgctgttgggacatagtgattcctacgtaaga
gacaagaggatgcaagcgaccattgcttataatcattttggtgagggtcttatccaaaga
atgccaaggtgtagacatggatatttccatgtagtgaacaatgactacacacattgggaa
atgtatgccatcggcggaagcgcgaatccaaccattaatagccagggaaaccgttacctt
gcccctttcaacccctttgccaaagaggttacaaagagagtggagaccggaaacaaatgg
agacaatggaattggagatcggaaggagacttgtttttaaacggagcgtatttcactcca
tcgggaagcggttcggcagccagctatgcgagggcctctagcttaggggccaagtcatct
tccttagttggcacaattacttcaaatgcaggcgccctttcttgtcgccatggcttcatg
tgttaa
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