Hibiscus syriacus (Rose-of-Sharon): 120120494
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Entry
120120494 CDS
T09559
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120120494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120120494
03110 Chaperones and folding catalysts [BR:
hsyr03110
]
120120494
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120120494
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120120494
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120120494
Messenger RNA biogenesis [BR:
hsyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120120494
Chaperones and folding catalysts [BR:
hsyr03110
]
Heat shock proteins
HSP60 / Chaperonin
120120494
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120120494
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120120494
Exosomal proteins of other body fluids (saliva and urine)
120120494
Exosomal proteins of breast cancer cells
120120494
Exosomal proteins of colorectal cancer cells
120120494
Exosomal proteins of bladder cancer cells
120120494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
SAP
FliH
Motif
Other DBs
NCBI-GeneID:
120120494
NCBI-ProteinID:
XP_038996065
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MSVSSLLSPIPGIAFFSVSNIDGSRRAVRKPLMVRNLMVRAGPKRILFGRDCREALQAGI
DKLADAVSVTLGPRGRNVVLFESETLKVVNDGVTIARAIELSDAIENAGAMLIQEVASKM
NDLAGDGTTTAIILTRAIIKYGLLAVSFGANPVSLKRGMDKTVKELVKELKKRSLPVKGK
EEIKAVASISAGNDDFIGNLIAEAIEKIGPDGVISFESSSSAETSVIIEEGMKIDKGYMS
PHFITNQDKSIVEFDNAKVLVTDQKISTVKEIVPLLEKTMQLSVPLLIFAEDISKQVLET
LVVNKMQGLLNVSVVKCPGFGEGKKALLQDIALMTGADFLSGDFGMMLAAATSDQLGVAR
KVTITSNSTTIVADPSTKAEIQARIMQIKKDLAETDNAYLSRQLSERIAKLSGGVAVIKV
GAYTEMELEDRKLRIEDAKNAAFSAMDEGIVPGGGATYIHLSQLIHKMKDSMEDMDERIG
ADIVAKALLAPSKVIATNAGVDGEVVVEKTRRFDWRIGYNAMSGRYEDLINAGVIDPCRV
SRCALQSAVSVAGIVLTTQAIMVEKMKQPKPAVPLVPGIGP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctcatccttactttcaccaatccctggaattgctttcttctccgtttctaac
attgatggtagtagaagagcagtgagaaaaccactgatggttaggaatttgatggtgaga
gctggtccaaagaggatattattcgggagagattgcagggaggcgttgcaagctggtatt
gataagttagctgatgctgtttctgtcaccttgggtcctagaggacgaaatgttgttctt
tttgagtctgagacactgaaagtagttaatgatggtgtaaccattgcccgggctatagaa
ctttccgatgctattgagaatgcaggagcaatgctaatacaagaggttgcaagtaaaatg
aatgatttggctggtgatggtactacaactgcaattattttaactcgagccattatcaag
tatggattgttggcagtttcttttggagctaatcctgtttctctgaaaaggggaatggat
aagactgtgaaagaattggtcaaggagcttaagaagagaagtttgcctgtgaaagggaag
gaggaaataaaagccgttgcttcaatctctgctggtaatgatgatttcattgggaacttg
attgctgaagctatagaaaagattggtcctgatggagtaatttcttttgagtcatcctca
tcagctgaaacctctgtgataattgaagaaggaatgaagattgacaagggatatatgtcg
ccccacttcatcactaatcaagataagtctatagtggagttcgacaatgccaaagtcctt
gtaactgatcaaaagatatcaaccgtcaaagaaattgttccattacttgaaaagactatg
caactgagtgtccctctgctaatctttgcggaggatatctcaaagcaagttctggaaaca
ctagttgtgaacaaaatgcaaggtttacttaatgtttctgttgtcaaatgtccaggattc
ggggaaggaaagaaagccctgttgcaggacattgcccttatgacaggagctgattttctt
tctggagacttcggtatgatgctcgctgctgcgacttctgatcaacttggtgttgcacgg
aaagtgactataacaagcaattccacaaccatagttgctgatccttctactaaggctgaa
atccaggcaagaataatgcagataaaaaaggatctagctgaaactgataatgcatacttg
tcaagacagctctcagaaagaattgcaaaactctctggtggtgtggcggtcattaaggta
ggagcatatactgagatggaacttgaagaccgtaaactaagaattgaagatgcaaagaat
gctgcattttctgccatggatgaagggatagtaccaggtggtggcgcaacttatatacat
ctttcacagctgattcacaaaatgaaggattctatggaagacatggatgaacgaattggt
gctgatattgtagcaaaagcactccttgcaccttcaaaagtaattgcaacaaatgcaggt
gttgatggagaagttgtagtggagaagactagaaggtttgattggcgaattgggtacaat
gcaatgtctggaagatacgaagaccttatcaatgctggagttattgatccttgtcgagtt
tcaaggtgtgccctacaaagtgctgtctctgttgctgggatagttctaaccacccaagct
ataatggtagagaaaatgaagcagcccaagccagcagtcccacttgttccaggaataggt
ccttga
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