Hibiscus syriacus (Rose-of-Sharon): 120120583
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Entry
120120583 CDS
T09559
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120120583
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
120120583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
WDR54
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
KNTC1_N
BCAS3_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
120120583
NCBI-ProteinID:
XP_038996122
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All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MVFIFLSFSVQFSSLVSRPNKKASSLSGLKKVKAEPTRAQKNNCLIFSQSFKHVIIFFAS
IVLTSSPDGPITAFDAVSGVSFHHFSGSRSPRRGLALVGNSFIAASHISPETTSASIHLY
NWWSSSVLHNLLVPEPVASLSATPDGLYLFAGGLSGRFYFISVPSGNIFASYSAHNKPVA
CLKQSEDGSLLISGGDDVTVSYVRIFQIVEASLDTSSTSLMLQRFVAHDGSVTAIDSSLA
QCNSTIISCSLDCTVKFWGLLDGTKLITVAFPCPIMGIALDQMRAEFFAAGSDGFIYKGL
INVGSKFHVNQGHECTRWAQKHESGIVSLVIASETKNLISASEDGMVYIWKTETGEAIMG
LGSHIGSISEMVVANGMEQDLNVGKKVDNFGDEINRVEQSRPLKDTLELEDVLRVAAKDR
SRAIDMLESAISTYKKLLEVILKEAKKGVLVAPPTVENKSIACNPKQIFQILPLNFCFQR
QNEDK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggtctttattttcctttcgttttccgttcaattttcctcccttgtaagcaggccaaac
aaaaaagcctcttcgttatctggcttgaaaaaagtaaaagccgaacccactcgggcacag
aaaaataattgtttaattttttctcagtccttcaaacatgtcatcatcttcttcgcatcg
attgtcctcaccagctcccctgatggtcccattaccgccttcgatgccgtctccggtgtc
tccttccatcacttctccggcagcagatcacctcgccgtggccttgccctcgttggcaac
tcattcattgctgcttctcatatttccccagagactacttcagcctctattcatctctac
aactggtggtcttcatccgttttgcataatctccttgttcctgaacccgttgcgtccttg
tcagctacccctgatggcttgtatttatttgccggtggactttcgggtcgtttttatttt
atttctgttccttcagggaatatattcgcatcatactctgcacataacaagcctgttgct
tgcctcaaacaaagtgaagacgggtcacttttgatatccggcggcgatgatgtcactgtt
tcttacgttcggatctttcaaatcgtcgaggcatcgcttgatacgagctccaccagtttg
atgttgcagagatttgttgcgcatgatggctcggtcactgcaatagactctagtttggcg
cagtgcaactctaccataatatcatgctccttggattgcacggttaaattctggggattg
ttggatggaacaaagttgataacagtggcattcccttgtccaattatggggatagcatta
gatcaaatgagggcagaattctttgctgcaggctctgatggattcatctacaaggggtta
ataaatgtcggaagcaaatttcatgtgaatcaaggccatgagtgcaccagatgggcacaa
aaacatgagagtgggattgtatctttagtgattgcgagtgaaacgaagaatctgatatcg
gcttctgaagacgggatggtttatatatggaaaaccgaaacaggcgaggccattatggga
cttggaagccatataggaagcattagtgaaatggtggtagctaatggtatggagcaagac
ttgaatgttggtaaaaaagttgacaatttcggtgatgaaataaacagggtggagcagagc
aggccattgaaggacactttggagttagaagatgtgctgcgggtggccgcaaaggaccgg
agccgagccattgatatgctcgagtcagcgatttcgacatataaaaagctgttggaggtc
attctcaaggaagccaagaagggtgtcctggtagcaccaccaacagtggaaaacaagagc
atagcctgtaatccgaaacaaatatttcagatactgcctctaaacttttgtttccaaagg
caaaatgaagacaaatga
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