Hibiscus syriacus (Rose-of-Sharon): 120121154
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Entry
120121154 CDS
T09559
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120121154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120121154
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
120121154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Diphtheria_T
Motif
Other DBs
NCBI-GeneID:
120121154
NCBI-ProteinID:
XP_038996523
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MAMEMEERGKVGTLIEKATNSTASEVDPRFLKAIKSVVRSSDKELRLAAHTLMDLMKRDH
SQVRYLTLLIIDELFMRSKLFRTLVVEKLDQLLALSVGFRRNMPLPAPSAIASTLRSKAI
EFLEKWNASFGIHYRQLRLGFDYLKNTLRFQFPNLQETEARIERERRERERRTREILQNK
FETLKTNFSSVKEEIRATVDEIRQCLDIVRTKEECVPPILLDDEDFVEFRSAELRQIRLD
SLKEGEKVHENNDNKVVFDALRELYKLLVTKHLVSVQESISILIRVEVADNRSRDSMLKE
LIDIRNSLMSVKKDCEESGCALPKTAKNKEEEEEDFWEEGDFGSTNNGATTEPEKRKEVE
SSNADEKSRSVEDRNSKKSNNRSENLAKLPASSKVKAKDKERGNLSSKGKEILGPENSVW
SDLLAEAPVLNWGSFLDNWGSVSNRDTLANQKGLELDNHWGRVDYDAVIPAEKIAELNLQ
ATIYLEKLGEIQPCRAPLNKGGLCQRRDLKICPFHGPIISRDDAGNPINQNSSTDNTDPD
LGSGLAEQLAKKAVNNVRERDKEEARKRKLAKQSLKREKLAKVREHNEVVLRDAAMASTS
ISAAFGEDMEETIGERSVGRRNKQTLASMLRKKVTTKDRLAQRLLNTRAIDATIRQMTQG
EDATYKEAFPNQW
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagatggaggagcgaggaaaagttgggactttgatagaaaaagctacaaac
tcgacggcttccgaggttgatccacgcttcctcaaagcaatcaaatcggtggtccgttca
tccgataaggaactccgactggcggcccataccctcatggacctcatgaagcgcgatcat
tcccaggttcgttatctcacgcttcttataatcgatgagcttttcatgcggtctaagctt
ttcagaacccttgtggttgagaagttagatcagttgttggccttaagtgttgggtttaga
agaaatatgccactcccagctccttcagcaattgcttccactttgcgttctaaggcaatt
gagttcttggagaagtggaatgcatcttttgggattcattacaggcagcttagattaggt
tttgattatcttaagaatactctcaggtttcaatttcctaatcttcaggagaccgaggcc
agaatagaacgagagagaagggaaagggagagaaggactcgggagattttacagaacaag
tttgaaacactgaagacgaattttagttctgttaaggaagaaatacgggctacggttgat
gagattagacaatgtttagatattgttcgtactaaagaggaatgtgtgcctcccatccta
ttggatgatgaagattttgtagagtttcgttctgctgaattgaggcagatccgccttgac
tcattgaaggaaggagaaaaagtacatgagaacaatgataacaaagtggttttcgatgca
ttaagagagctgtataagcttttagtgactaagcatctggtttcagtacaagaaagcatt
tctattctcataagggttgaagtggctgacaacaggtcacgagattccatgctaaaggag
ttgattgatatacggaacagtcttatgtctgtgaagaaggattgtgaagaatctggttgt
gctttacccaaaactgcaaaaaataaagaagaggaggaggaagatttctgggaggaaggt
gactttggatcaaccaacaatggagctactactgaacctgagaagcgtaaggaggtagaa
agttctaatgcagatgagaaaagtagatctgttgaggataggaattccaagaaatccaat
aatcgaagcgaaaatcttgctaaacttccagcttcaagcaaggtgaaagccaaagataaa
gaacgcggtaacttgagttctaagggcaaagagattctgggacctgaaaattctgtctgg
agtgaccttttggccgaagctccagttctcaattggggttctttcttggataattggggc
tcagtctctaatagggatacattagcaaatcagaaaggcttggagcttgacaatcactgg
ggaagagtagattatgatgctgtgattccagctgagaaaattgctgaattgaatcttcag
gctactatttacctggaaaagttgggagaaatccaaccgtgccgtgcacctttgaataaa
ggtggactttgtcagagaagagatttgaagatttgtccatttcatgggcccattatatct
cgagatgatgcaggaaacccaatcaatcagaattcttcaacagataatacagatcctgat
ttaggctctggtttagcagagcagttggcaaaaaaagctgtgaataatgttagggagcga
gataaagaggaagcaaggaagagaaaacttgcaaaacagtcattaaagcgggaaaagctt
gctaaagttcgggaacacaatgaagttgttcttcgtgacgctgcaatggcttcaacatca
atatcagcagcttttggagaagacatggaggagactattggagagaggtcagtggggaga
agaaacaaacaaactctggcatccatgctgcggaagaaagttacgacaaaagataggtta
gctcagaggcttctaaacaccagggcaatagatgcaacaataagacagatgacccagggt
gaggatgcaacttataaagaagcctttcccaatcaatggtag
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