Hibiscus syriacus (Rose-of-Sharon): 120121772
Help
Entry
120121772 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: pinin-like
KO
K13114
pinin
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
hsyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120121772
03015 mRNA surveillance pathway
120121772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120121772
03041 Spliceosome [BR:
hsyr03041
]
120121772
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120121772
Spliceosome [BR:
hsyr03041
]
Complex C
Other components
EJC/TREX
120121772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
120121772
NCBI-ProteinID:
XP_038996991
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MGSTAVEKTADELQREIDELHRQQREITERLRDPRGLRRGGLSSIGTRKLASNGSRQHGF
LRPSDGTDVEDQPPAKKRLSSAVVKQDGWSRRDGNQRLKKDAEVPIADHVPRILPKDEDP
GLINRNRRMLGQLLGTLERFRREDKQISETEAYMRRSNSLQRAEQRAREESEKLRQQERE
QIAEKRRRDLTLRARVAAKAEEKKMELLFLQWSEHHKKLNNYIRTKTEPPIYYLPTKPLY
EDAAIHEQQKEQEFLEWKAARREELSKYQKQIGEEYVGNVEKELERWQNARKARKANNDM
NLQETMDKELDSHRLEHGPKKRKIPGGNNNEDEEDVEDINVGEDDMMDDVLDVDDNNGRA
DEAAKVELVNTSPVPDNAERP
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggggagcactgcagtcgagaagacagcagatgagcttcagcgagagatcgatgagctt
catcggcaacaacgagagatcacggagaggctgagggatcctagaggtctccgaagggga
ggattgtcgagcatcggtactcgtaaattagcatccaatggttctcgtcaacatggcttt
cttcgaccttcagatgggacagatgtagaagatcaacctccggctaagaagcgattgtca
tcagctgttgtaaagcaagatggttggtctagaagggatggaaaccaaagactgaagaag
gatgctgaagttccaattgcagatcatgttccaaggattctgcccaaggatgaggaccca
ggcttgattaataggaatagaaggatgttggggcaacttttagggactttggagagattc
aggagagaagataagcaaatttcggagacagaggcatatatgagacgatcaaattctttg
caaagagccgagcaaagagctcgtgaagaaagtgagaagctgaggcaacaagagcgtgaa
cagattgcagaaaagaggaggagagatctgactctcagggctcgggtggctgcgaaggct
gaagaaaagaagatggagttgttgtttcttcagtggagtgagcaccacaaaaagcttaac
aattatataaggaccaaaaccgagcctccaatatattatttgccaactaaaccattgtat
gaagatgcggctatacatgagcaacaaaaagaacaagagtttctagaatggaaggcagct
aggagggaagaattatctaaatatcagaaacaaataggagaagagtatgttggaaacgta
gaaaaggagttggagaggtggcaaaatgcccggaaagctaggaaagcaaacaatgacatg
aacctacaagaaactatggacaaagaattggatagccacagactggagcatggtccaaag
aagagaaagatacctggtggaaacaacaatgaagatgaggaagatgtggaagatatcaat
gttggggaggatgatatgatggatgatgttttggatgttgatgataataatgggagggca
gatgaggcggccaaagtggagcttgtaaacactagtccagtccctgataatgctgagcgg
ccatga
DBGET
integrated database retrieval system