KEGG   Hibiscus syriacus (Rose-of-Sharon): 120121772
Entry
120121772         CDS       T09559                                 
Name
(RefSeq) LOW QUALITY PROTEIN: pinin-like
  KO
K13114  pinin
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013  Nucleocytoplasmic transport
hsyr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120121772
   03015 mRNA surveillance pathway
    120121772
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120121772
   03041 Spliceosome [BR:hsyr03041]
    120121772
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     120121772
Spliceosome [BR:hsyr03041]
 Complex C
  Other components
   EJC/TREX
    120121772
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 120121772
NCBI-ProteinID: XP_038996991
LinkDB
Position
Unknown
AA seq 381 aa
MGSTAVEKTADELQREIDELHRQQREITERLRDPRGLRRGGLSSIGTRKLASNGSRQHGF
LRPSDGTDVEDQPPAKKRLSSAVVKQDGWSRRDGNQRLKKDAEVPIADHVPRILPKDEDP
GLINRNRRMLGQLLGTLERFRREDKQISETEAYMRRSNSLQRAEQRAREESEKLRQQERE
QIAEKRRRDLTLRARVAAKAEEKKMELLFLQWSEHHKKLNNYIRTKTEPPIYYLPTKPLY
EDAAIHEQQKEQEFLEWKAARREELSKYQKQIGEEYVGNVEKELERWQNARKARKANNDM
NLQETMDKELDSHRLEHGPKKRKIPGGNNNEDEEDVEDINVGEDDMMDDVLDVDDNNGRA
DEAAKVELVNTSPVPDNAERP
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggggagcactgcagtcgagaagacagcagatgagcttcagcgagagatcgatgagctt
catcggcaacaacgagagatcacggagaggctgagggatcctagaggtctccgaagggga
ggattgtcgagcatcggtactcgtaaattagcatccaatggttctcgtcaacatggcttt
cttcgaccttcagatgggacagatgtagaagatcaacctccggctaagaagcgattgtca
tcagctgttgtaaagcaagatggttggtctagaagggatggaaaccaaagactgaagaag
gatgctgaagttccaattgcagatcatgttccaaggattctgcccaaggatgaggaccca
ggcttgattaataggaatagaaggatgttggggcaacttttagggactttggagagattc
aggagagaagataagcaaatttcggagacagaggcatatatgagacgatcaaattctttg
caaagagccgagcaaagagctcgtgaagaaagtgagaagctgaggcaacaagagcgtgaa
cagattgcagaaaagaggaggagagatctgactctcagggctcgggtggctgcgaaggct
gaagaaaagaagatggagttgttgtttcttcagtggagtgagcaccacaaaaagcttaac
aattatataaggaccaaaaccgagcctccaatatattatttgccaactaaaccattgtat
gaagatgcggctatacatgagcaacaaaaagaacaagagtttctagaatggaaggcagct
aggagggaagaattatctaaatatcagaaacaaataggagaagagtatgttggaaacgta
gaaaaggagttggagaggtggcaaaatgcccggaaagctaggaaagcaaacaatgacatg
aacctacaagaaactatggacaaagaattggatagccacagactggagcatggtccaaag
aagagaaagatacctggtggaaacaacaatgaagatgaggaagatgtggaagatatcaat
gttggggaggatgatatgatggatgatgttttggatgttgatgataataatgggagggca
gatgaggcggccaaagtggagcttgtaaacactagtccagtccctgataatgctgagcgg
ccatga

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