Hibiscus syriacus (Rose-of-Sharon): 120122010
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Entry
120122010 CDS
T09559
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00531
Glycosaminoglycan degradation
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
120122010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hsyr00536
]
120122010
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
120122010
Glycosaminoglycan binding proteins [BR:
hsyr00536
]
Heparan sulfate / Heparin
Enzymes
120122010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
120122010
NCBI-ProteinID:
XP_038997203
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MELQFGLFLFLTLIPVIFAHDISHGSIVVDGTMTVAQTDDNFVCATIDWWPHDKCDYDQC
PWHYTSVTNLNLSHPFLAEAVRAFNNLRIRVGGSLQDQVLYDVGNLKSPCHPFQKMKDGL
FGFSKGCLHMERWDELNRFFKETGVLVTFGLNALHGRHKIKRSLWGGDWDSSNAQDFLKY
TISKGYHIDSWEFGNELSGHGIGAHVLADQYGKDLIKLKKIINELYEGSQSKPSLVAPGG
FFEEEWFVKLLLTSGSRVLDFMSHHMYNLGAGVDPKLVSKILNPDHLNKAAYTFGNLTHV
IRRHGPWSSAWVGESGGAYNSGGAHVSNTFVNSFWYLDQLGMSSKYHTKVYCRQTLIGGN
YGLLNATTFVPNPDYYSVLLWHRLMGKVVLSVESDASPFLRSYAHCSKGRAGVTLLVINL
SNQTNFIMKVQNSISLKLAVSEQNISRGGFAHTLKKTFSWVGTKASDEALFREEYHLTPK
DGYLQSQTMVLNGIPLEFTEAGNMPSLNPVRVNVNSPISISPLSIAFIVFPNFEAPPCG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcagtttggtttgttcttatttttgactttgattccggtgatttttgctcat
gatattagtcatggatcgattgtggtcgatggaactatgactgttgctcaaaccgatgat
aatttcgtctgtgctacgatcgattggtggcctcatgataagtgtgattacgaccagtgt
ccatggcactatacatcggtaactaatctgaacttgtctcatcctttccttgccgaagct
gtccgagctttcaacaatttgaggataagagttggaggctctttgcaagatcaagtgttg
tacgatgtcgggaatttgaagtctccttgccatccattccagaagatgaaagacgggttg
ttcggattttcgaagggatgtttacacatggagaggtgggatgaactcaaccgtttcttc
aaagaaactggtgtactagtgacgttcggcctgaacgctctccacgggagacataaaatt
aagaggagcctttggggaggggattgggactctagcaatgcgcaagattttttgaagtac
accatttcaaagggataccacatagattcatgggaattcggtaacgagttgagcggacat
ggtattggtgcacatgttctcgctgaccagtatggaaaagacttgatcaaactaaagaaa
attataaatgagttgtacgaaggttcacaatctaaaccttctctcgtagctcccggagga
ttctttgaagaagagtggttcgtcaagcttcttctgacctcaggctcacgtgtgctcgat
ttcatgagccaccatatgtacaatttgggtgcaggtgttgatccgaaactcgttagtaag
atattgaatcccgaccacttaaacaaggcagcatatacattcggtaatcttacacatgtc
atccggaggcacggtccttggtcttctgcatgggttggagagtctggtggggcatataac
agcggcggtgctcacgtgtccaatacattcgtcaacagcttctggtatttagatcaactc
ggaatgtcgtcaaaataccatactaaagtatattgtaggcaaacactgatcggtgggaac
tatggtcttctcaatgcgacaacatttgttccgaaccctgattattacagtgtgcttcta
tggcaccggttgatgggaaaagtggttctgtctgttgaaagtgatgcttcgccgtttcta
cgatcctatgctcattgctccaaaggaagagctggtgtaactttactggtgatcaacttg
agcaatcaaacgaatttcataatgaaggttcaaaacagcatcagcctgaagttggctgtg
agtgaacagaacattagtcggggcggcttcgcacatactctcaagaaaacattttcctgg
gtaggaaccaaagcttccgatgaagcactattccgagaggagtatcatttaactcctaaa
gacggctaccttcaaagccaaactatggttctcaacggcatccctttggaatttaccgag
gctggaaacatgccatcgctaaaccctgtccgtgttaatgtgaattctccgatatccatc
tcgcctttgtcgatcgcattcatagtattccccaacttcgaagctccaccttgcggatga
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