KEGG   Hibiscus syriacus (Rose-of-Sharon): 120122512
Entry
120122512         CDS       T09559                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
  KO
K14962  COMPASS component SWD2
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120122512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120122512
   03036 Chromosome and associated proteins [BR:hsyr03036]
    120122512
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     120122512
Chromosome and associated proteins [BR:hsyr03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     120122512
    COMPASS/SET1 complex (yeast)
     120122512
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 PAC11 Beta-prop_ACSF4 Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_DCAF4 KNTC1_N Beta-prop_Nup120_160 Cytochrom_D1 Beta-prop_WDR35_TULP_N Beta-prop_RSE1_2nd VPS11_N Beta-prop_HPS5 DUF4934 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 120122512
NCBI-ProteinID: XP_038997579
LinkDB
Position
Unknown
AA seq 347 aa
MACLGPQSEREDKVSLELTEEIIQSMEIGMVFKDYSGRISSMDFHRTSNYLVTASEDESI
RLYDVSSATCLKTINSKKYGVDRVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK
GHHDRVVSLSLCSRNESFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAISYDDQGIVFAI
AFGGYIRMFDARKYEKGPFEIFSVGGDVSDANVVKFSNDGRLMLLTTMDGHIHVLDSFRG
TLLSTYNVKPVPNNCTLEASFSPEGMFVISGSGDGRAYAWSVRSGKEVANWMMNSEPSVI
NWNWMSTDTEPPCIKWAPGNLMFVTGSTELSFWIPDLSKLAAYVGRK
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggcttgtttagggccgcaatccgagagagaagataaagtatcattggaactcaccgag
gaaatcattcaaagcatggaaatcggcatggtttttaaagattatagcggtagaatcagt
tcaatggattttcacagaacgtcgaattatttagtaactgctagtgaagatgaatccatc
cgcctttatgatgtttccagcgccacgtgtttgaaaacaattaatagcaaaaagtatggg
gttgatcgagtttgctttacttcacatccaacgacagttatttactcttcaaagaatggt
tgggatgaatcattgcgtcttctctcattgcacgataacaagtacttgcggtattttaaa
ggtcaccatgacagagttgtttcgcttagcctatgctcacgcaatgaaagtttcatctct
ggttctcttgatagaactgtgctgctttgggatcaacgagcagagaaatgtcagggcctt
ttacgcgtgcaaggaaggcctgccatatcttatgatgaccaagggatagtctttgctatt
gcctttggaggatacatcagaatgttcgatgctcgcaagtatgaaaagggtccttttgaa
atcttttctgttgggggagatgtatccgatgctaatgttgtaaagttcagcaacgatgga
cggctcatgcttttgacaactatggatggacatattcatgtgcttgattcatttcgtggc
acgcttttatccacatacaatgtgaagccagttcctaataattgcacgttagaggcatct
tttagccctgagggaatgtttgttatatcaggttcaggcgatggtcgtgcatatgcctgg
agtgtaaggagtggaaaagaagttgcaaattggatgatgaatagtgaaccttctgtaata
aattggaattggatgagcactgacactgagcctccgtgcattaaatgggcacctgggaat
cttatgtttgtaaccggatctaccgagctctcattttggattccagatctatctaaattg
gcagcatatgttggaaggaagtaa

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