Hibiscus syriacus (Rose-of-Sharon): 120122677
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Entry
120122677 CDS
T09559
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120122677
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
90S particles
Other 90S particles
120122677
Pre-60S particles
Other pre-60S particles
120122677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR3_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_EML
WD_LRWD1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
DUF3375
DUF6368
Motif
Other DBs
NCBI-GeneID:
120122677
NCBI-ProteinID:
XP_038997728
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MISAISWVPKGAAKAEPAVVELPSKEEIEEMIKSGVLDKSEDNGSENEDADMDAEAEAEA
EKQTGDVSQALAVADALGKTSKNNTGSQLEDLTDGLKELDMENYDDEDDGIELFSKGLGD
LYYPSNEMDPYLKDEDDDDSEEIEDMTIKPMDSVIVCARTEDDVSHLEVWIYEDSDEGDS
NMYVHHDVIISAFPLCTAWLDCPLRGGEKGNFLAAGSMEPSIEIWDLDIIDEVQPCLVLG
GIVEKKTKKGKKKSKYKDGSHTGAVLGLAWNKEYRNILASASADKQVKIWDVAAGKCNIT
MEHHEGKVQAVAWNHHVPQVLLSGSFDRSVVMKDGRVPTHSGFKWSVTAEVECLAWDPHT
EYSFVVSLEDGTIRGYDIRAAKSDPSSESKPSFTLHAHDKAACSISYNPAAPNLLATGSM
DKMVKLWDLSNNQPSCVASKNPKAGAVFSISFSQDNPFLLAIGGSKGKLGVWDTLSETAV
SGKFGNYSQQPKRPKT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagcaatttcatgggtgccgaaaggggcagcaaaagctgaaccagcagtggtt
gagttaccttccaaagaagagattgaagagatgatcaagtccggtgtcctagataaaagt
gaagataatggcagtgagaatgaagatgcagatatggatgctgaagctgaagctgaagct
gagaagcaaactggggatgtttcccaagcacttgctgtggcagatgctctaggaaaaact
tccaagaacaacacagggtcacaattggaagatcttacagatggcctgaaagaacttgac
atggaaaattacgatgatgaggatgatggtatcgagttatttagcaaggggcttggtgac
ctttactacccaagcaacgaaatggatccatatttgaaggatgaggatgatgatgattca
gaagagattgaggacatgaccattaaacccatggattctgttatagtttgtgcacgcact
gaagatgatgtcagccatcttgaggtttggatatatgaggattcagatgaaggtgattca
aacatgtatgttcaccatgatgtcatcatttcagcatttcccctttgcactgcatggctt
gactgcccacttagagggggagaaaaaggaaattttttggctgctggttcaatggagcca
tcaatagaaatatgggaccttgacattatcgatgaagtacagccatgtttggtattaggt
ggcatagtggagaagaagacaaagaaaggaaagaagaaatcaaaatacaaggatggtagt
catactggtgcggttcttggtctagcttggaacaaggaatacaggaatatccttgctagt
gcaagtgctgacaaacaagtaaagatttgggatgttgctgctggaaaatgcaacataacc
atggaacatcatgaaggcaaggttcaagctgttgcttggaatcatcatgtgccacaagtt
cttcttagtggatcatttgatcgttcggttgtcatgaaggatggaagagtgccaactcat
tctggttttaagtggtccgtcactgctgaggttgaatgtttggcatgggatcctcacaca
gagtactcatttgtggtgagtcttgaagatggtacaatcagaggttatgatattcgagct
gccaagtctgatccatcttccgagtcaaaaccaagttttactctccatgctcatgacaaa
gctgcttgcagcatttcgtataatcctgcagcaccaaatcttcttgcgactggttccatg
gacaaaatggtaaaactttgggatttgtcaaacaatcaaccttcttgtgttgcgtccaag
aatcctaaagcaggagctgtcttctccatttccttctcacaagataatccctttttgctg
gctattggaggctctaagggaaaattaggagtttgggatacattatccgagacagccgta
tccggaaaatttgggaactacagtcaacagccgaagagaccgaaaacatag
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