Hibiscus syriacus (Rose-of-Sharon): 120123230
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Entry
120123230 CDS
T09559
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120123230
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120123230
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120123230
NCBI-ProteinID:
XP_038998088
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All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MGDSSRFSVGILGFWCSLLVLIQTLQAHIGEYDDYLRERELMAKENLEKAYRANPEQIVN
HYNEHAAKTMMGLNSTRRDMRGKKKNGGPCVASNPIDQCWRCDEYWEINRMKLADCALGF
GHGTTGGKDGEFYVITDSSDDIHDPKPGTLRHAVIQTRPLWIIFQHSMVITPEQELLIMT
NDKTIDGRGVKVHIAYGAGITIQFAKNIIIHNLRIHDTVACEGGTIKDGEGHAGVRTKSD
GDGISIFGSTNVWIDHLSMYRCSDGLIDAIQGSSAITISNCHFTDHNDVMLFGAHDSYDL
DEKMQITVALNHFGKGLVQRMPRSRFGFIHVVNNDYTHWLMYAIGGSSHPTYVSQGNRYS
ASSETVNKEVTKRDYSPESEWKNWNWITQGDQFDNGAFFVESGSSWVTKKYGGDVMLAYQ
PGKIAPLLTKDSGALNCIKGKAC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattccagcagatttagtgttggcatccttggattttggtgttcgcttttggtt
ttaatccaaaccctgcaagctcacattggggaatacgatgattacttgagggagcgggag
ttaatggcgaaagagaatctggaaaaggcttatcgggctaacccggagcagattgttaat
cactacaacgagcatgcggccaagacgatgatgggtttgaattccacgagacgtgatatg
agggggaagaaaaagaatggcggtccttgcgtggcgtctaatcccatcgatcaatgttgg
cggtgcgatgaatattgggagattaataggatgaagcttgccgattgcgccctcggattc
ggccatggcaccaccggtggaaaagacggtgagttttatgttatcaccgattcttccgat
gatattcatgacccaaagcctggaactctccgtcacgccgtcatccaaacgaggccgctt
tggatcatcttccagcactccatggtgatcacgccggaacaggagcttctcataatgacc
aacgataaaaccatcgacggaaggggagttaaagtgcatatcgcttacggcgccggtatt
accatccagttcgccaagaacattatcatccataaccttcgtatccacgacacggtggct
tgtgaaggtggcacgatcaaggatggtgaaggacacgccggggttaggacaaagagtgac
ggagatgggatctctatcttcggatcaaccaacgtttggatcgaccatctctccatgtac
cgatgttccgatggtcttatcgacgctattcagggctccagcgccatcaccatttcaaac
tgccatttcaccgatcacaacgacgtgatgttgttcggagcacacgactcgtacgacctc
gacgagaagatgcagatcaccgtcgcgttgaaccacttcggaaaagggttggtccagaga
atgccgagaagccgattcggtttcatccatgttgtaaacaacgactacacccactggctg
atgtacgccatcggcggcagcagccaccctacctacgtcagccagggcaaccgctactcc
gcctcatcggaaacagtaaacaaagaagtcaccaaaagagattactccccggaatcggag
tggaagaactggaactggataacccaaggtgatcagttcgacaatggtgccttcttcgtc
gagtccggcagttcgtgggtgaccaagaaatacggcggcgacgtaatgcttgcataccag
cctggtaaaattgcgccgttactgacaaaggattccggcgcactcaactgcataaaaggc
aaggcttgctaa
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