Hibiscus syriacus (Rose-of-Sharon): 120123309
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Entry
120123309 CDS
T09559
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120123309
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120123309
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120123309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_11
zf_RING_Vps8
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
PHD_NSD
Prok-RING_4
PHD
Motif
Other DBs
NCBI-GeneID:
120123309
NCBI-ProteinID:
XP_038998160
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MGHRNMLCPNQMIDLEMDQHGQGYPHHEPCIILGGRPNYPPPDLQMRVRAPGSTTTLDTH
PLPEHYSNSMFYGIPQYPSVQHHNHSPNLDLGIGSASNYYIPYMANLMLGAPVNHGPTDQ
MPPSSNYAFLGVSADEYARSCHFMDNVRGSYKRKNSEVIPANFQHFNASPSSSSSGTPLN
ARHPDGVGTIDVAPFTIPQLRGNGPPPIREAGSQRSVMNRLGATAVDPVLMHSANHVFQG
NYIGQPFQPTITDGGAPVWTQAPGVPYMHGSNVVALMETSLRSSANFSQSSPLDVRNHNF
HHPAPPIEGVRSHSINIHPQVAPVPHRSLASYTSPGVMNPSHDGWEVGRRHLGPMPPTGF
RIYHSRQESGVVSETTVRHHNLPHLRVLPPDGVAILELPEFDEVGNYVDHHRDMQLDIED
MSYEELLALGERIGNVNTGLSEETITSKLKTITYSTFATNINLEEAAPIDQEPDSCIICQ
EDYKNEEKIGTLDCGHNYHTDCLKKWLFVKNACPICKSEALTKESKNV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacagaaatatgctatgccctaaccaaatgatagatttagaaatggatcagcat
ggccagggatatccccatcacgagccctgcatcattttgggtggcagacctaattaccca
ccacctgatttgcagatgagagtcagagcgccagggagcacaactactcttgatactcat
cccttaccggagcattatagcaacagtatgttctatgggattccccagtaccccagtgtt
cagcatcataatcattccccaaatcttgatcttggtattggaagtgcatccaactattac
attccctatatggctaaccttatgttgggtgctcctgtaaatcatggacccacggaccag
atgccaccttcaagcaactatgccttcctaggagtttcagcagatgaatatgctaggagt
tgccacttcatggataatgttagaggctcatataagagaaagaattctgaagtaatccca
gcaaattttcagcattttaatgcctcaccaagctctagttcctcgggcacaccattaaat
gctagacatcctgatggagttggcacaatcgatgtggcacccttcaccattcctcagtta
agggggaatggccctccaccgattagagaagctggatcccaaagaagtgttatgaacaga
ttaggggcaactgcagtggatcccgttttgatgcatagtgctaaccatgtttttcaggga
aattacattggccagccttttcagccaacaataacagatggaggtgccccagtttggacc
caggctcctggggttccttatatgcatggtagcaatgtggttgcacttatggagactagt
cttagaagttctgcaaacttttctcaatcttctccccttgatgttcggaaccataacttc
catcaccctgcaccacctattgaaggagtaagaagtcatagcattaacattcatccacaa
gtagcaccggttcctcatcgctccctagcaagttacacctcaccaggcgtcatgaatcct
tcacatgatgggtgggaggtggggcgtaggcatttgggaccaatgcctcctaccggcttt
aggatatatcattctcgccaagagagtggtgttgtatctgagaccactgtgagacaccat
aatcttcctcacttgagagttcttccaccagatggagttgctatattggagctcccagaa
tttgatgaagtaggaaattatgtcgatcatcacagagatatgcaattggatatagaggac
atgtcgtacgaggaactgttggctctgggtgagcggattggaaatgtgaataccggtttg
tctgaggaaaccatcacaagtaaattgaaaacaataacttattcaacatttgctacaaat
attaatctggaagaagcagcacctattgaccaggaacccgattcgtgcattatttgccag
gaggattataagaacgaagagaagatcggaactcttgattgtggacacaattatcacaca
gattgcttgaagaagtggctgttcgtgaagaatgcatgccccatctgcaaatccgaggca
ttaaccaaagagtccaagaatgtataa
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