Hibiscus syriacus (Rose-of-Sharon): 120123558
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Entry
120123558 CDS
T09559
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120123558
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120123558
REST complex
120123558
Heterochromatin formation proteins
Other heterochromatin formation proteins
120123558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
120123558
NCBI-ProteinID:
XP_038998339
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MKRARDDTYPGSQFKRPFSSSKAESYGQNQIPGGSGGAGGGEGGGGGGGGGAGSMLQKLT
TNDALTYLKEVKEMFRDQKEKYDMFLEVMKDFKAQRTDTVGVIARVKELFKGHNNLIYGF
NTFLPRGYGITLDEDEAPKKTVEFDEAISFVKKIKKRFQHDEHVYKSFLDILNMYRKEHK
DINEVYTEVASLFEDHPDLLEEFTIFLPDSSAAPMTQQVPYGRTSTQRYNERSSATPTLR
YTQMDKQRRRDRILTSHAGRDLSVDRPELDDDKAMIKMQKEPRKHMEKDDRDLRIRDNDD
PEHENNRDFNLQRFPDKKRSGRKVEGFSTYEDRDTSKSMFNQGFIFCEKVKEKLCSSDEY
QAFLKCLNIYSNGIIKRNDLQNLVTDLLGKYPDLMTEFNQFLERCEDTDGFLAGVISKKS
LSVDGHESRPLEEKDREPKREIKGAKEKERFKEYMGKSIQELDLSNRQICTPSYRLLPDD
YPIPVASQRSELGTRVLNDYWVSVTSGSEDYSFKHMRRNQYEESLFICEDDRFELDMLLE
SVSSTAKRAEDLLNSINENKINMDSPFRAEEHFTVLNLRCIERLYGDHGLDVMEILRKNP
ALALPVILIRLKQKQEEWTKCRLDFNKVWAEIYSKNHYKSLDHRSFYFKQQDSKNLSVKS
LLAEIKELKEKNQKEDNVLMASVAGHRQPVSPHLEYEYSDVNIHEDLYKLIEYSCEEGCS
TKEQLNRVMRLWTTFLEPMLGVPPRQSGREGTDGAGKAQNPALNCTASSIAECDGSPGAD
ATVNSGQTKAAGDGDKMSSPELTVSCRSGLANGETLVREHSDRVTREDSKLEKEIKFTTD
KNCGIHMHANGMEAENNHSRTNFDGASGKGAADYRPTSSVGGEAREANADPVRYSEAVGV
AKHALLVNGVPTDDSNASKCHEESAGPFRIEKEEGELSPTGVSEEDNFVAYGDTCPKVVP
KAQHGVQSRQHQSGNGKDSHHYVDAGGEHDADADDGDSENASEAGDNASGSESAADECSR
EEHEEEEEVEHDEVDGKAESEGEAEGMTDMHLGGDGTSLFSEHFLFTAKPLSKHAQAVLP
KDDRNIYWTFYANDDFYVLFRLHQILYERILSAKTNTGAAEIKRKHPKDTSSSDLYARFM
SALYSLLDGSTDNSKFEDECRAVIGNQSYVLFTLDKLIYKLVKQLQAVAADEMDNKLLQL
FDYEKSRKYWKTMDSVYYENARVLLHEENIYRLKYSSSPSRLSIQLMDNVIEKPEAFAVS
MEPNFSAVLHDDFLSVYPSKKEPHGLTLERNKRKYAGLDEFAATCLAMEGVELVNGLENK
IACNSYRISYVLDTEDFFYRRRNSSQHRPSYNSRARIQRFHRFLSSSQ
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagcaagagatgatacgtatcctggttctcaatttaaacgtccattcagttct
tctaaggctgaatcctatggacaaaaccaaatacccggtggaagtggtggtgcaggagga
ggggaaggtggaggtggaggcgggggaggaggagcaggaagtatgttgcagaaactgact
acaaacgatgccttaacgtatctaaaggaagtcaaggagatgtttcgggatcaaaaagag
aagtatgacatgttccttgaagtcatgaaggatttcaaggctcaaaggactgacactgtc
ggtgtcattgcccgagtgaaagagttattcaaagggcataacaacttgatttatggattt
aatacattcctgccgaggggctatggaattacccttgatgaggacgaggctccgaaaaag
acagttgaatttgacgaagcaatcagttttgtaaagaagataaagaaacgtttccaacat
gatgagcatgtctataaatcatttcttgatatattgaatatgtaccggaaggagcacaag
gacataaatgaggtttataccgaggttgcttctcttttcgaagaccatcctgatcttctt
gaggagttcacaatatttttaccagattcatcagcagcacctatgacacaacaagttcca
tatggtcgaacctcaactcaacgttataatgagcgaagctctgctacacccaccttgcgc
tacacacaaatggataagcaacgtcggagggatagaattcttacttcccatgctggtagg
gatctcagcgttgaccgtcctgaattggatgatgacaaagcaatgattaaaatgcaaaaa
gaaccgagaaaacacatggaaaaggatgatagggatctgagaattcgtgataacgatgat
cccgagcatgaaaacaatagggactttaacttgcagcgttttcccgacaaaaagagatcg
ggaagaaaggttgaaggattttctacttacgaagatagggatacttcaaaaagcatgttc
aaccaaggttttatattctgcgagaaagttaaggagaagctgtgcagctcagacgaatac
caggcattcttaaaatgccttaatatatatagcaatggaataatcaaaagaaacgatttg
caaaatttggtgactgatttacttggcaagtacccagatcttatgactgagttcaatcag
ttcttggagcgttgtgaggatactgatgggttccttgccggtgttattagtaaaaaatca
cttagtgttgacggacatgagtccaggccattagaggaaaaagatagagagccaaaacgc
gaaatcaagggagctaaggaaaaggagagatttaaggagtacatgggaaaatcaatacaa
gagcttgacctttctaaccgccaaatttgtactccaagctatcggcttctaccagatgat
tacccaatacctgtagcaagtcagagatctgagcttggcacacgagtgctaaatgattat
tgggtatccgtcacttcaggaagtgaggattattcttttaagcacatgcgccgaaatcag
tatgaagagagcttgttcatatgtgaggatgataggtttgaactggatatgttgttagaa
tcagtgagctcgacagccaagcgtgcggaggacttgctgaacagcattaatgaaaataaa
atcaatatggattctccgttccgcgcggaagaacacttcactgttctgaatttgaggtgc
atcgagcggctgtacggtgaccatggtcttgatgtaatggaaatattacgtaaaaatcct
gctcttgcattacccgtaatattaattcgcctgaagcagaagcaagaagaatggacaaag
tgccgtctagacttcaacaaggtttgggctgaaatttattcaaaaaaccattacaaatca
cttgatcatcgcagcttctatttcaagcagcaggattcaaagaacttgagtgtgaaatct
ttactggctgaaatcaaggagttgaaagagaagaaccagaaagaagacaatgttcttatg
gctagcgttgctggtcaccgacaacccgtttctccacaccttgaatacgaatattcggat
gtcaacattcacgaggacctgtataaacttatcgaatattcatgtgaagaggggtgttca
acaaaagaacagttaaatcgagtcatgaggctctggaccactttcctggagcccatgttg
ggtgttcctcctcgacaaagtggcagagagggtactgatggtgccggcaaagctcagaat
cctgcattaaactgcactgcctctagcattgctgaatgtgatggaagtcctggagctgat
gctactgtaaattccgggcaaacaaaggctgccggtgatggagacaagatgagttcacca
gaactaactgtttcttgcaggagtggtttggcaaatggggaaactttagttagagaacac
tcggatcgtgtcactagagaggattcaaagctagagaaagaaatcaaatttacaactgat
aaaaactgtggaattcacatgcatgcaaatggaatggaagcagaaaacaatcacagcaga
accaattttgatggggcatcggggaaaggcgcggctgattatagacctactagtagtgtt
ggtggcgaggcccgggaagctaatgctgaccctgtacgttattcggaggctgttggtgta
gctaaacatgctttgttagtaaatggagtacctacggatgactctaatgccagtaaatgt
cacgaagaatccgctggtcccttcagaatcgaaaaagaagaaggtgaattatcacctacc
ggtgtttctgaggaagataattttgttgcttacggtgatacttgtccaaaggttgtgcca
aaggcacaacatggtgttcaaagtagacagcaccagtctggaaacgggaaagactcgcat
cattatgtggatgctggtggagaacatgacgcggatgctgatgatggggatagtgaaaat
gcctcagaggctggcgataatgcatcgggcagtgagtctgcggccgacgaatgctctcgt
gaagagcatgaagaggaggaagaggtcgaacatgatgaagttgatggtaaggccgagagt
gaaggcgaagctgaagggatgactgatatgcatctgggaggagatggcacgtccttgttt
tcagaacatttcctgtttacggcgaagcctctttcaaagcatgcacaggcagttttaccc
aaagacgatcgaaacatttattggactttttatgcaaatgacgatttctacgttcttttc
agacttcatcaaatcctgtatgaaagaatactgtcggcaaaaacaaatacaggagctgct
gaaataaagaggaaacatccaaaagacactagttcttcggatttatatgccaggtttatg
agcgcactttacagtctgcttgatggatcaaccgataattcgaagttcgaggatgaatgc
cgggctgtaataggaaaccagtcatacgtgttattcacattggacaagttgatatataaa
ttggttaagcagcttcaagctgttgcagcagatgagatggataataagcttcttcaattg
tttgactatgagaagtcccgaaaatattggaagacgatggattcagtgtattatgagaat
gcacgtgtcctccttcacgaggagaatatatatcgattgaaatattcatcttcgccatct
cgtttgtctattcagctgatggacaacgtcattgaaaagcctgaagcatttgccgtttcc
atggaacctaatttttcagccgttttgcacgatgactttctgtccgtctatcccagcaag
aaggagccacatggccttacactcgagagaaacaagaggaagtatgcaggtttagatgaa
tttgctgctacttgcttggccatggaaggtgttgaactggttaatggtttagagaacaag
atagcttgcaactcctacaggatttcttacgtgttggacaccgaagacttcttttatcgt
agaagaaattcatcacaacacagaccttcatacaatagccgggctagaatacagcggttc
catagatttttatcgtcttcgcaataa
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