Hibiscus syriacus (Rose-of-Sharon): 120123562
Help
Entry
120123562 CDS
T09559
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsyr01009
]
120123562
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120123562
03041 Spliceosome [BR:
hsyr03041
]
120123562
Protein phosphatases and associated proteins [BR:
hsyr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120123562
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120123562
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120123562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
TelA
RNA_bind
Motif
Other DBs
NCBI-GeneID:
120123562
NCBI-ProteinID:
XP_038998344
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MKVKVSSPELGGISPPDCISEPEEKEVSDEEDDDRNHKHRRRDTCSQPLERDSTDPLFTR
PYRKRNKPFENGHNESQAGETWKNSNSLPLEKDLRPKFDRRFPGLSSLPRGHLDLNQRIR
PNQTFSGDCGPGRGRGRDNSAWNQHDSRFNSVDISYQMVQPGSVAPGLFAGRGLLNLSNA
QAPSWSAFGLMSRIPNGGLDTLHSIGLQGVLRPPMNSSLDMAIPRQCCRDFEERGFCLRG
DMCPMEHGVNRIVVEDVQSLSQFNLPVTVPSAQILAKPAGPGPPPSGLPPSTTSMNSKGI
HGKNNKSGITEDAVGLYGAYSGSTSANGDLYDPDQPLWNNNGPEASAALTGLRSPKTNET
EPLPNDDISDRPHDCLRDSADNELTIRSTGSQSMNLSVGGRVGSSRSGIDTKDKIGPITL
DHPENETKEEQGAFPSSQDISCQVKQINSEDDGSKVMDSSLKPRIDFRSSRKVTQKALHT
LFVNGIPQKCNKREALLSHFRKFGEVIDIYIPLNGERAFVQFSRREEAEAALKAPDAVMG
NRFIKLWWANRDNIPVDGIKSGSGVPVNPRGITASAIPAQPAANRGKDNLLPVAQKSNVF
FYKTQKSNVVHCADTPSLNSPKPVSMNGPQAPPPLQKTLDALEQMKEELRKKQEMLEQKR
NNFWRQLDKLEKQSSVVKGDLLTEPAAKRQKVGIAADPAKASIPGSSESGAPAAKPYFIG
MTDKNKLTENGASQSPKPSTSMALQESTSSKQQSRKPHLCALIRHPFPMNKYKLDNRPIA
FRVIPPLPSGFADVAVLKEHFLRCGDLFSVELQDLENEDAGNTGSEPLKNCSALVTYSTR
QSAERAYINGKCWQGHNLQFKWLTSNSNPHSKETPSSTPEEPLEADGQTEEKSACSVAQE
VAAASGNGESGELDLESFVEHMESAEASERSPSPTSSMKESPKGDTS
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtctcatcgcctgagctcggtggtatttctcctcctgattgcataagt
gaacctgaggagaaagaagttagtgatgaagaagatgatgatcgcaaccataagcatcgt
cggcgggatacatgctctcaacctttagagagagattctacagatcctttatttacaagg
ccatacagaaagcgcaataaaccctttgaaaatgggcataatgaatctcaagcaggtgaa
acctggaaaaattctaacagtttgcctctagaaaaagacttgagacctaagtttgataga
agattccctgggttatcatcacttcctcgaggacatttggacctgaaccagagaattagg
ccaaaccaaacgttcagcggagattgtggtcctggccgtggaagaggaagggataactcc
gcttggaatcaacatgattctaggttcaactctgttgatatttcttatcaaatggttcag
ccaggatcagttgctccgggtctctttgcgggaaggggattgctgaatctttcaaatgca
caagccccatcatggagtgcctttgggctaatgtcaagaataccaaatggtggtcttgat
acgctccattctattggtctacaaggggtgctcaggccgccgatgaattcttcattggat
atggccattcctcgccaatgttgcagagattttgaagagcgtggattttgtctaagagga
gatatgtgcccaatggagcatggtgtcaatcgtattgttgtggaagatgttcagagtctg
tcacagtttaaccttcctgtcacagttccaagtgcacaaatattggcaaaacctgctggc
ccggggccaccaccttcaggccttcctccttcaaccacttcgatgaacagcaaaggtata
catggcaaaaataacaaatctggaattacggaggatgctgtaggtttgtatggtgcatat
tctggttctactagtgcaaatggtgatttgtatgatcctgatcaacccttgtggaataac
aatggcccagaagcatcagccgcactgactggacttcggtcacccaagactaatgaaaca
gaaccgttgccaaatgatgacatctctgatcgtcctcatgactgcttacgtgatagtgct
gataatgaattgacgattagaagcaccgggtcacagagcatgaatttgtctgttgggggt
agagttggtagctccagaagtggaatagacacaaaagacaaaattggtccaataaccttg
gaccatcctgagaatgaaaccaaggaagaacaaggagcatttcccagctctcaagacatt
tcttgtcaggtcaaacagatcaacagtgaggatgatggctccaaagttatggattcttca
ttgaagccgcggattgattttcgtagtagcagaaaagtaacacaaaaggcacttcatacg
ctgtttgtcaacgggattccccagaaatgcaacaaaagagaggctcttctttctcatttt
cgtaagttcggagaggttattgacatttacattccgttaaatggtgaacgggcgtttgtc
cagttttcaaggagggaagaggccgaagctgctttgaaggcacctgatgctgtaatgggt
aaccgttttattaagctttggtgggctaatcgggataacatacctgttgatggaataaaa
agtggcagtggcgtacctgtaaatccacgtggtataacagcatctgctattccagctcaa
cctgctgctaatagaggaaaggataatcttcttcctgttgctcagaagagtaatgttttt
ttttataagactcagaagagtaatgttgtccattgtgccgatacgccttctctgaactcg
cctaaacctgttagtatgaatggtccccaggctccacctccattgcagaaaacgttagac
gctctggaacaaatgaaagaggaattacgcaagaagcaggaaatgctggagcagaagcgg
aacaacttttggcgccagttggacaaacttgagaaacaatccagtgttgtcaagggagat
ctactgactgagccagctgctaagaggcaaaaggtgggtattgcagctgatcctgcaaaa
gcttcgattcctggttcctctgaatctggtgctcctgcagcaaaaccatactttataggg
atgacagataagaacaaattgactgagaatggtgcgtctcaaagtccaaaacctagtacc
tctatggcattgcaggaatctacaagctcaaagcagcagtctcggaagcctcatctgtgt
gcacttattaggcatccattcccgatgaataaatacaaattggacaaccgaccaattgcg
tttagagttattccaccattgccttctggttttgcagatgttgctgttttgaaggagcac
ttcttacggtgtggagatcttttctctgtggaactacaagacttggaaaacgaagatgcc
ggtaataccggatcagagccattgaagaattgctcggcgcttgtaacttacagcactcgc
caatcagcggaaagggcttatataaatggtaaatgctggcaaggacacaatttgcagttc
aaatggcttacatctaacagtaaccctcatagcaaagaaactccatcttccacacccgag
gaaccattagaagccgatggccagacagaagaaaaatcagcatgcagcgttgcccaagaa
gtcgctgctgcttcaggcaatggggaatccggggaattggaccttgagagcttcgttgag
catatggaatcggctgaagcctcggagcggagtccatccccgacatctagcatgaaagag
tcgcctaaaggtgacacaagttga
DBGET
integrated database retrieval system
