Hibiscus syriacus (Rose-of-Sharon): 120123590
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Entry
120123590 CDS
T09559
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120123590
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120123590
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
BsuPI
Motif
Other DBs
NCBI-GeneID:
120123590
NCBI-ProteinID:
XP_038998370
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MGIKYMGMDNVIECRNPSSSRGYWDFVWDGYAFDKMETKYVEVVAHTDDIVELSFTKKWN
FTTDYGKTIPLNIDKRFIVRRGVPGLYMYGVLERKEDFPDAQMYQLRIVFKLNADRFGFM
AISDTRRGIVPRGDDRDSTRSQTLAFKEAVLLTNPSNPQLKGVVDDKYQYSCENKDNKLH
GWISDNDAVGFWIITPSNEFRTGGPHKQDLTSHVGPIALSMFVSTHYTGIDIDVTYKKGE
AWRKVFGPVLIYLNSASSDDDYRSTLWNDAKRQLSEEIESWPYNFTRSHDFPRAEERGDV
CGQLLVRDRCLDDEPMQARSAFVGLAAPGNVGSWQTEGKGYQFWTQTDDTGRFDIKNVRA
GEYNLYAWVHGFIGDYKLDLSITIQPENQINLGTLIYDPPRNGPTLWEIGIPDRTAAEFF
IPEPDPAFVNPLCLDAADKFRQYGLWDRYSELYRHGDLVYTVGVSNYSRDWFFAHVTRNT
GNSTNWSTTWQIKFNLQHVNERGNYTLQLALAAASNAELQIRFNNPDAVRPDFTTNRIGY
DNAVARHGIHGLYRMYGIIVPGNRFKEGDNTIFLTQARSLSSFNVVMYDYIRLEAPAD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgggaataaaatacatggggatggataatgtgattgaatgtagaaacccgagctctagt
agagggtactgggattttgtttgggatggttatgcctttgacaaaatggaaacaaaatat
gtcgaggttgtagcacatactgatgacattgtagagctttcctttaccaaaaaatggaat
tttacaacagattacggcaagacaattcccttgaacattgacaaaaggttcatagtccga
cgaggcgttccggggctgtacatgtacggtgttttagagcgcaaggaggattttccggat
gctcagatgtatcaattaaggattgtcttcaagctcaatgcagacaggttcgggttcatg
gcgatatcggacaccagacgagggatcgtgcctaggggagatgatcgagatagtactcgt
agtcagactcttgccttcaaggaagctgttctgttaaccaatccatccaatccgcaactt
aagggagtggttgatgacaagtaccaatattcatgtgaaaacaaagataacaagcttcat
ggatggatatccgataacgatgcggtggggttctggataatcacccctagcaatgaattc
cgaaccggtggtccacacaagcaggacctcacttctcatgttggtcccatagctctctct
atgtttgttagtactcactataccgggatcgacatagatgtgacatataagaaaggggaa
gcttggagaaaagtttttggtcccgtgctgatctatcttaattccgcttcttctgacgat
gattaccgcagcactctctggaacgacgctaaaagacagttgagtgaagaaatcgaaagc
tggccttacaatttcactagatcacatgattttcctcgagctgaagaacgaggagacgtt
tgcggtcagttactagtgcgagaccgatgcttggatgatgaaccgatgcaggcacgatcc
gcctttgtggggttggcagctcctggaaatgtaggatcatggcaaacggaaggaaaggga
tatcaattttggactcaaacagacgacaccggtcgtttcgatattaagaacgtccgagca
ggggaatataacttgtacgcatgggtccatggtttcatcggagactacaaattggacctc
agtattactatccaaccagaaaatcagatcaacttgggtacccttatctatgatcctcca
agaaatggccctacattgtgggaaatcgggattcctgaccggacagctgccgagttcttc
ataccggaacccgaccctgcattcgttaaccctttgtgcctagatgcagccgataaattc
agacaatacggattgtgggatcggtactcagagctttatcgtcacggtgatcttgtctac
actgtcggcgtcagcaattattctcgggattggttcttcgctcatgttacgaggaacaca
gggaacagtacgaactggtcaaccacatggcagatcaaattcaatctccaacatgttaac
gagagaggaaactacacactacaattagccttggcagcagcttctaatgctgaattacag
attcgattcaacaatccagacgctgttcgaccggattttacgacgaacagaataggttac
gataatgcggtagcgaggcatggaatccatggattgtacagaatgtatggtattattgta
cctggtaacagattcaaagaaggggacaacaccatctttctaactcaggccagaagcctt
agctcattcaacgttgttatgtatgactatatccgattagaagcacctgcagattaa
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