Hibiscus syriacus (Rose-of-Sharon): 120123603
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Entry
120123603 CDS
T09559
Name
(RefSeq) uncharacterized protein LOC120123603
KO
K24738
rabconnectin-3b
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120123603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120123603
Membrane trafficking [BR:
hsyr04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
120123603
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ASA1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
EIF3I
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
120123603
NCBI-ProteinID:
XP_038998384
LinkDB
All DBs
Position
Unknown
AA seq
1496 aa
AA seq
DB search
MKCRSVACIWSSTPPVHRVTATAALDHPPTLYTGGSDGSILWWNLSNTDSHSEIKPIAML
CGHAAPIADLAICCPIVASGEKNTVNSSNVALNSSFDHGGALLSACTDSMLCVWSRSSGH
CRRRRKLPPWVGSPLIIRTLPWNPRYACLGCCFIDAAHLSDHHLECAEGGEISMDKESQS
RKPPKCTVVIVDTYTLTIVQTVFHGNLSIGPLKFMDIFSSVDGEKHFSLLADSFGKLQLV
PLPKDFYQDGGEGETRLQRSSKEEIMTLEDGLVEAGQVVSIATCRTLVATVIKDRSIFRL
LGSGTIIGVILFMNNVLCIEDKYGRAHVVGAMFLESKNSGNAQSTGETHESEIFLVWNNR
GSALLYEISYLDNKFNSEPLCEISAASVPLAARLSFSFVQLSQILLRIESVCFIVEDQFQ
WKPRVTIWSLKRNHDHAKHFDECKMLGEGISFLGWTSAASLDHKNESLGGCNTKLTSIQS
SVSSSETTNSIHVDDSSYFVPKEQIVSSSMVISENLYAPSAIVYGFFSGEIQVVWFNLFR
GLDSPVGSPHLAVDSHISKQIFAGHTGAILCLAAHRMAGAAKGWSFSQVLVSGSKDCTIR
IWDLDSGNLITVMHHHVGPVHQIILPSARTERPWSDCFLSIGEDACVALTSLETLRVERM
FPGHPDYPAKVVWDGARGYIACLCRDHTRISDAIDVLYIWDVKTGCRERVLRGTASHSMF
DHFCKEISATSISGSSLTGNTSVSSLLLPIHEDGSFTHYKLNNSENGATLSKMTGSSTLL
ANNNKVNSGKGPYVSRTRKQPIKCFCPYPGIATLSFDLAALIDPFQKNEPITKNGDGQEN
SYMKEQWSETFSPHHMTSDGGFNTDQSSTDGVVGHDWIKTLEEYLVRFSLSFLHLWDVDC
GLDDLLVADMKMKRPNGFLVSSGLQGDKGSLTLSFPGFTESLELWKSSSEFCAMRSLTMV
SLAQHMISLSHSSSATSSALAAFYTRSFADKFPEIKPPLLQLLVSFWQDESEHVRMAARS
LFHCAASRAIPAPLCSQQATKYAKLVRSLNGIEESEHEISKNEEMIVVGRSSECLLETEG
TSQVEKAKLLAWLESYEMQDWISCVGGTSQDAMTSHIIVAAALVIWYPSLVKPSLATLVV
QPLVKLVMAMNEKYSSTAAELLAEGMESTWKACIGTEIPRLISDIFFQIECVSSPSANSA
GENPAVPASIRETLVVTLLPSLSMADILGFLTVIESQIWSTASDSPVHLVSLATLIRVVR
GSPRSLVQYLDKVVNFILQTMDPGNSVMRKTCHQRAMTTLREVIRVFPMVTMNESSTKLA
FGDAIGEINSASIRVYDMQSVTKIKVLDASGPPGLPSFLLGAPEMSVTTVISALSFSSDG
EGLVAFSEHGLMIRWWSLGTVWWEKLSRNLVPVQCTKVIFVTPGDGFSPKTSRTSIMGSV
LGHSTEANSPEGAAKSYSDRLKLLIHGLDLSYRLQWVGKRKVVLTRHGVEIGNFSL
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgccgatccgtggcgtgtatttggtcaagcacgcctccggtccaccgcgtcaca
gccaccgccgccctcgatcaccctccgactctctacaccggcggatccgatggctctatc
ctctggtggaacctctccaacacagattcccattcggaaattaaaccgattgctatgttg
tgtggtcatgctgcaccaatagctgatctcgccatttgttgtcccattgtagcatctgga
gaaaaaaatacagttaattcaagtaatgttgctttgaattctagctttgatcatggtggt
gcattactgagtgcttgcactgacagtatgttgtgcgtctggagcagaagtagtggccac
tgcaggcgtagaagaaaactgccaccttgggttggcagtccattgattattcgtacactg
ccttggaatccaagatatgcttgtttaggctgttgctttattgatgctgcccatttatct
gaccatcatttggagtgtgctgaagggggtgagatttcaatggataaagaatctcagagc
aggaagcctcccaagtgtactgttgttattgttgatacgtatactcttaccattgtacaa
actgtttttcatgggaatttgtccattgggcctttgaagtttatggacattttttcttca
gttgatggagaaaagcatttttcactcttggctgactcctttggtaagctacaattggtt
cccttgccaaaggacttttatcaagatggtggtgagggcgagactaggttacagagatct
tctaaggaggaaataatgacattggaagatggccttgttgaggctggacaagttgtatca
attgcaacgtgtaggacccttgttgctactgtgataaaagatcggtctatatttaggcta
ttgggaagtggcactattataggagtgattctttttatgaacaatgtcctttgcattgaa
gacaagtatggtcgggcacatgttgtaggggctatgtttctcgaaagtaaaaattctggg
aatgcacaaagtactggtgaaacccatgaatctgaaatttttttagtgtggaataataga
ggatctgcacttttgtatgaaatatcatatctagataacaaatttaattctgaacctctg
tgcgaaatctctgctgcttctgttcccctagctgcaaggttgtcattttcttttgtccag
ttgagccaaatacttcttcgcattgagtcagtttgcttcattgttgaagaccaatttcag
tggaaaccacgtgttacaatctggtctcttaaacggaatcatgatcatgctaaacacttt
gatgaatgtaaaatgcttggagaaggcatttcttttcttggctggacttcagctgctagt
ttggatcataaaaacgagtctttgggtggatgcaataccaaattaacttctattcagagc
tctgtttccagctcagaaactacaaatagcatacatgtcgatgatagttcttattttgtc
cctaaggaacaaattgtatcttcttccatggttatttctgaaaatctttatgctccttct
gcgattgtatatggcttctttagtggtgaaatccaagttgtgtggtttaatttgtttcgg
gggcttgattctccagttggaagtccacatcttgcagtagactctcatatatccaaacaa
atctttgcaggtcacacgggtgctatactatgtctggcagcacatcggatggcgggtgct
gctaaaggatggagttttagtcaagttttagtttctggaagcaaggattgcactattcgt
atatgggatcttgattctggtaatctcattactgtcatgcaccaccatgtaggtcctgtg
caccaaatcattctaccctctgctcgaactgaacgcccttggagtgattgctttctttcc
attggagaggacgcttgtgtcgctcttacttcacttgaaactttgagagtggagagaatg
tttcctggacatcctgactatcctgcaaaagttgtttgggatggtgcaagaggttatatt
gcatgtctctgtcgggaccataccagaatttctgatgccattgatgttctatacatatgg
gatgtgaagaccgggtgtagagaaagggtccttcgtgggactgcttctcattcgatgttt
gatcatttctgcaaagaaattagtgcaacttccatttctggttcatcactgactggaaat
acatcagtttcatcattacttcttccaatacatgaagatgggagctttactcattacaag
ttaaataattcagaaaatggagctactttgtcaaaaatgactgggtctagcactttgcta
gcaaataataataaagtgaattctggaaagggaccatatgtttctcgaaccagaaaacaa
cccattaaatgcttttgcccatatcctggaattgctaccctgagctttgatcttgcagca
ttgattgatccttttcagaagaacgagcctataaccaagaatggtgatggtcaagagaat
agctatatgaaagaacagtggagtgagacatttagtccccatcatatgacttcagatggt
ggctttaacactgatcagagttcaacagatggtgtagtagggcatgactggatcaaaacg
cttgaagaatatcttgttcgatttagcttgtcctttttgcatttatgggatgtggattgc
ggtcttgatgatttattagtagctgacatgaagatgaaaaggcctaatggttttttggta
tcttctggtttgcaaggcgataaagggtctttgacactgtcatttcctggttttacggaa
agtcttgagctttggaaatcatcatcggagttttgtgcaatgaggtcactgacaatggtt
tcacttgcccaacacatgattagcttgtcccactcaagctcagccactagcagtgccttg
gccgcgttctatactaggagttttgcagacaaatttccagaaataaagccacctttactc
cagctattggtgagtttttggcaagatgaaagtgaacatgtacgtatggcagcacggtct
ttatttcattgtgcagcatcaagagctattccagcccctctgtgtagtcaacaagcaact
aagtatgcaaaacttgttagatctctgaatggaattgaagaaagtgaacatgaaatttca
aaaaatgaagaaatgattgtggttggacggagttctgaatgtttgttggaaactgaaggg
acttcccaggttgagaaagctaaactgcttgcatggctagaatcttatgaaatgcaggac
tggatttcttgtgttgggggaacaagtcaagatgccatgacgtctcacattattgttgct
gcagcactggtgatatggtaccctagcctagtgaagccaagtcttgccacattggtggtt
caaccgctggtgaagttggttatggcaatgaatgaaaaatatagttccactgctgcagaa
ctgcttgctgagggaatggagagtacatggaaggcatgcattggcactgagatacctcgt
ttgattagtgacatattctttcaaattgagtgtgtaagtagtccgtcagccaactcagct
ggtgaaaacccagctgtaccagcatctatccgtgagacattagttgtgacccttcttcca
agtctatcaatggctgatattcttgggtttttaactgtgatagagagccaaatttggtca
actgcatccgactcgcctgtccacctagtgtctcttgcaactctcatcagggttgtgcgt
ggttctccaagaagtttggttcagtaccttgataaggtggttaacttcatcctacaaacc
atggaccctggcaactctgtcatgcgcaaaacttgccatcaacgtgcaatgacaacgtta
agggaggttatacgtgtgtttccaatggtaaccatgaatgaaagctcaaccaaattggct
tttggtgatgctattggggagattaacagtgccagcattcgggtgtatgacatgcaaagt
gttacaaaaataaaagtattggatgcgagtggacctccaggacttccgagttttctttta
ggagcacctgaaatgtcggtgactactgtaatatcagctctaagcttttcctcagatgga
gagggtttggtagctttctctgaacacgggctgatgatcaggtggtggtccttgggaacc
gtgtggtgggagaaactgagccggaaccttgttcctgtccaatgcaccaaagtgattttt
gttactccaggggatggattctcaccgaaaacatcaagaacaagcataatgggaagcgta
ttgggacatagtaccgaggccaattcaccggagggtgctgctaagagttattctgataga
ttaaagctcttgattcatggccttgacctttcttaccgtctccaatgggttggcaaacgt
aaagtagtgcttacgaggcatggcgttgagataggtaatttctcgttataa
DBGET
integrated database retrieval system
