Hibiscus syriacus (Rose-of-Sharon): 120123708
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Entry
120123708 CDS
T09559
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Module
hsyr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120123708
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120123708
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
120123708
NCBI-ProteinID:
XP_038998463
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All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MASLKKILAIVVLIQCATLSESSRMLEKKKKKTDGNTFNVISFGAVGDGVEDDSKGFKDA
WNAACGSSASSPMVVVPQGKTFLLQPLTLDGECNSNNSTFQIDGNIIAPSEPSAWERKRN
CHHWIGFKNFDGLFIQGSGTINGHGSKWWKLSCKDKNKGCHFRKPTGFMIANSKNVEIKG
LTFEDSPKMHIAFENSICIHATDLTIKAPGNSPNTDGIHIQRSTNVTMDKTIIQTGLLGG
HGYARNVKFERITSYASARPIVIDQFYFPHKQCKNQTSGVEISNVSYEEIHGTSHKEIAV
QLSCSESTPCKNITTKNINLKNEDQNDNTLSYCHNAHGLRNGRFINATRVK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtttgaagaaaatcctggcgatagttgttttgattcaatgcgctacactgagc
gaatcttctcgtatgttggagaagaagaagaagaaaacggatggcaatacatttaatgtg
attagcttcggagctgttggagatggagtcgaagatgattccaagggctttaaggatgct
tggaatgctgcttgcggttcctcagcttcgtcaccaatggttgttgtgcctcaagggaag
acctttctgcttcaacccttaactttggatggcgaatgcaactcaaacaactctacattc
cagattgatgggaacattatagccccaagcgaaccctctgcatgggaacgcaaaagaaac
tgtcaccattggattggattcaaaaattttgatggtctcttcattcaagggtctggtaca
atcaatggacatggatctaaatggtggaagctttcttgcaaagacaagaacaagggctgt
cactttcggaaaccaaccggttttatgatagcaaactccaagaacgtagagattaaaggc
ttaacctttgaagacagtccaaaaatgcacattgcatttgagaactcgatttgcattcac
gccactgatcttacaatcaaagctccaggaaacagtcccaacactgatggcattcatatc
caacgttccaccaacgttaccatggacaagacaattattcaaaccggtttgctaggaggc
cacggatatgcacgaaacgttaagtttgaacgcataacttcttatgcttctgctcgacct
attgttatcgatcaattttattttcctcataaacagtgcaagaaccaaacatcgggtgtg
gagatcagcaatgtaagctatgaagaaatccatggaacatcacacaaagaaatagcagtg
caactttcatgcagtgagtccactccatgcaaaaacatcaccacgaagaacattaatctc
aagaatgaagaccaaaacgacaacacgctgtcgtattgccacaatgctcatggccttaga
aatggaaggtttataaacgcaacacgtgtcaaataa
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