Hibiscus syriacus (Rose-of-Sharon): 120124147
Help
Entry
120124147 CDS
T09559
Name
(RefSeq) autophagy-related protein 18b-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120124147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120124147
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120124147
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120124147
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120124147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
BCAS3_WD40
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_ACSF4
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
120124147
NCBI-ProteinID:
XP_038998811
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MANHSSAYPIIGASFNQDNSGFAISTKDCFKIIDSNTGRLCYERAVGTFIIVEMLYSSSL
LAIVGAGEQPSLSPRRLCLFNTTTGAPLREMTFLTSILSVRLNRKRLVVVLLEKTYIYDT
NSLSMLDTIDTVSNSKGLCAFSPSLDGCFLALPASTTKGAVLVYNVMELQLHCEIDAHRS
PLAAIALSSSGKYIATASEQGTIIRVHLVLEATKSYSFRRGSYPSTIFSLSFSPSLQLPD
ILAATSSSGSVHIFSLGFETNQRSKKSGSFLGSILPDSVNDALDPAHHHVLHNAVSAGVR
SYAVVRKVDKVVDSSSSEIALCRAVISLIAYNGYFQEYTFTLNSQNESTWSLEREFNLLG
VSSGNAETS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcactcctccgcttacccaatcatcggcgcttctttcaatcaagacaacagt
ggttttgcaataagcactaaagattgtttcaaaataatcgattcaaacaccggaaggctc
tgctacgaacgagctgttggaactttcattattgttgagatgctgtacagttcaagtctt
ctcgccattgttggagctggtgaacagccatctttatctccacgccgtctttgtttgttc
aatacaacaaccggtgctcctctccgagaaatgactttcctaacttcaattctttccgtt
cgcttgaataggaaaaggcttgttgtggttttactagagaaaacctacatatatgacaca
aacagtctctcaatgctggataccattgatactgtgtcaaattcgaagggactttgtgca
ttctcccctagtttggatggttgcttcttggctcttcctgccagcacgactaaaggagct
gtattagtgtacaatgtcatggagcttcagttgcattgtgagatagatgctcaccggtct
cctttggctgcaattgctttatctagcagtggaaagtacattgcaacagcatctgaacag
ggaaccataatcagagttcatctggttttagaagcaactaagtcatacagttttcggagg
ggatcatacccatcaaccatattttcattgtcattttctccatcattacaacttccagat
attcttgcagccacaagctcttcaggttctgttcatatcttctctctggggtttgagaca
aatcagaggagcaaaaagtcgggtagttttcttggatcgatactacccgattccgtgaat
gatgcgctagacccagctcaccatcatgtgcttcacaatgctgtttctgcaggagtcaga
agctatgcagtggtacgcaaggtggacaaagtggttgattcgtcctcatccgagattgca
ttgtgtagggccgtaatatcgttgatagcgtacaacgggtactttcaggaatataccttc
actctcaacagccagaacgagtctacatggagtctggagcgcgaattcaaccttctggga
gtcagttcaggtaatgctgaaacctcatga
DBGET
integrated database retrieval system
