KEGG   Hibiscus syriacus (Rose-of-Sharon): 120124362
Entry
120124362         CDS       T09559                                 
Name
(RefSeq) histone deacetylase 9-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082  ATP-dependent chromatin remodeling
hsyr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120124362
   03083 Polycomb repressive complex
    120124362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsyr03036]
    120124362
Enzymes [BR:hsyr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120124362
Chromosome and associated proteins [BR:hsyr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     120124362
   HDAC complexes
    Sin3A-HDAC complex
     120124362
    BRAF-HDAC complex
     120124362
    REST complex
     120124362
    SHIP complex
     120124362
    MiDAC complex
     120124362
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120124362
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120124362
  Chromatin remodeling factors
   NuRD complex
    120124362
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 120124362
NCBI-ProteinID: XP_038998993
LinkDB
Position
Unknown
AA seq 427 aa
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYDLHKKMEIYRPHKAYPVEL
AQFHSADYIEFLNRVTPDTQHLFSNELVKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHTRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKHGDMFFPGTGDVKDIGAREGKFYAINVPLKNGIDDTSFIRLFKI
IISKVVEMYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAACVRIVKKFNLPLLVTGGGGY
TKENVARCWTFETGVLLDTELPNEIPDNEYIKYFEPECLLSIPNGHIENLNSRSYLSTIK
MQVLENLRSIQHAPGVQMQEVPPDFYIPDIDEEEQNPDERMDQHTKDKQIQRDDEYYDGD
NDNDSLH
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgcgttcaaaggacaaaatatcctacttttacgatggagatgtagggagcgtatacttt
ggtcctaatcatccaatgaagccgcaccggctttgtatgactcaccatttggttcttgcc
tatgacctccataagaaaatggaaatttatcgtccccacaaggcttaccccgttgaactc
gctcagttccattctgctgattatattgagtttttaaatcgagttacgccagatacgcag
cacttgttctcgaatgaattggtgaaatacaatcttggagaagactgccctgtatttgaa
aacttgtttgaattttgtcaaatttatgctggcggaacaatagatgctgcacgaaggtta
aacaataaactatgtgatattgctataaattgggctggtggtttacatcatgcgaagaaa
tgcgaggcatctggcttttgttacatcaatgacttggttttgggaatcttggagcttctt
aagtatcatacccgtgttttgtatattgacatagatgtacatcatggggatggagttgaa
gaagccttttatttcacagacagggtgatgactgttagttttcacaagcacggagatatg
ttttttccaggaactggtgatgtgaaggatataggagcaagagaagggaagttttatgcc
ataaatgttccactcaagaatggaattgatgacactagcttcattagattgtttaagata
attatctccaaggttgttgaaatgtatcaaccaggcgcaatagttctccaatgtggggca
gattctcttgccggggatcggttgggctgtttcaatctctcaattgatggacatgctgcg
tgtgttagaattgtgaagaaattcaacctacctttactggttactggaggtggaggatat
acaaaagaaaatgttgcacgttgttggacttttgaaacaggagttcttttagatacagaa
cttcctaatgagatccctgacaatgagtacatcaaatattttgaaccagagtgcctgttg
agtattccaaacgggcacatagagaatttaaatagcagatcatatcttagtacgatcaag
atgcaagtgttggaaaatcttcgttccatccaacatgctccaggtgtacagatgcaagag
gttccacctgatttctatattcctgatattgatgaagaagaacaaaatcccgatgagcgc
atggaccagcacaccaaagacaagcaaattcagcgcgatgatgaatactatgatggtgac
aatgataatgattcattacactga

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