Hibiscus syriacus (Rose-of-Sharon): 120124525
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Entry
120124525 CDS
T09559
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120124525
04121 Ubiquitin system [BR:
hsyr04121
]
120124525
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120124525
Membrane trafficking [BR:
hsyr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120124525
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120124525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING-like
Rad50_zn_hook
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
120124525
NCBI-ProteinID:
XP_038999116
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MSSTSSYWCYSCSRLVRVLDLDGTNDAVVCPYCDGGFVEEINSSDNHSRRFPAMNMIASN
DNSRQNSNRTRNLVFRRNRRGSVDRSNINPIIVLRGSTDDDDSTADGNNRGDFGFFYDDG
SGSGLRPIPTSMSETLMGMGFDRLLEQLSQIEITGLSQPENPPASKSAIESMPTVEIEKT
HVCSETQCAVCKEPFELGTEAREMPCKHIYHEDCIIPWLSLRNSCPLCRHELPSDRSESN
DDVSETVGLSIWRLPGGGFAVGRFRGEREVPVVYTEMDGGFGESGSDHGAPRRVTWVGVR
RRENGFRRVVRNLTSFLRRGLRSPSQSQSHGGREEPSGLTRNGSTSMFRRFTRSISSSSN
SVLE
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgacgtcgtcgtattggtgttacagctgttcccgtctagttcgtgtgttggat
ttagatggtacaaacgacgcggttgtgtgtccgtactgtgatggtggcttcgtcgaggag
atcaattcatcggataatcacagccgtcgatttccagccatgaatatgatcgccagcaac
gataacagccgtcaaaattcgaatcggacgcgaaatctcgtctttcgtaggaaccgccgg
ggctccgttgaccggtcaaatatcaatccgatcattgtccttcgtggttcaaccgatgac
gatgacagcacagcagatggaaacaaccgaggcgactttggattcttctacgacgacgga
tctgggtccggtttaagaccgataccgacttcgatgtccgaaactttaatgggtatgggt
ttcgatcggttattggagcagctttcgcagatcgagataaccggactgagtcaacccgaa
aacccgcccgcttcgaagtcagcaatcgaatcaatgccgaccgttgaaatagagaagacc
catgtttgctccgaaactcaatgtgccgtttgtaaagaaccattcgagctcggtacggaa
gctagggagatgccgtgtaagcatatttaccacgaggactgtattatcccatggctgtct
ctccggaactcgtgtccgctttgccgccacgaattgccgtcggatcggagcgagtcaaac
gatgacgtttcggagacggttgggctgagtatatggaggcttcccggtgggggtttcgcg
gtgggaaggtttaggggggaaagggaagtgccggttgtttacacggagatggatgggggg
tttggagaatcgggttcagatcatggagcaccgagaagggtgacgtgggtcggggtcaga
agaagagagaacgggtttaggagagttgttagaaacctgacgtcgtttttgaggaggggt
ttgaggtctccgagtcagagtcagtctcatggtgggagggaagaacccagtgggttgacc
agaaatggttcaacatcaatgtttcgtaggtttacaagaagcataagttcaagctccaat
tctgttttggaataa
DBGET
integrated database retrieval system
