Hibiscus syriacus (Rose-of-Sharon): 120124562
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Entry
120124562 CDS
T09559
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1-like
KO
K14016
ubiquitin fusion degradation protein 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120124562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120124562
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120124562
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
DUF5088
Motif
Other DBs
NCBI-GeneID:
120124562
NCBI-ProteinID:
XP_038999138
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MKTTTGCCRDGREGFFMVLRVGYLHRILNWDIGNNRDRDQYIPFERITSNYGRSYNSRVH
ARIRIHYRCYSLSFIDKAHLEKGDKVLMPASALDRLTYMGIEYPMLFELTNASAGRVSHC
GVLEFVADEGLIYLPYWMMQNMHLEEGDIVQVKSASLANATYVKLQPHTTDFLDMSNPKA
ILKTTLRNYSCLTVGDTIMIPYNNKNYYINIVETKPYPVVSIIETDCKVDFAPLDYKEIE
KPSPPLQSNKKLKVEEEPSRKRIPFSGSARRLDGKPAAPLLKHYHSDVGSETVASKSSSS
TSSQRAWKLVFGSNGNWPQNETEKVAMRNSQDRSKRKEPTQAFTGRKYSLI
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaacaactggatgttgcagggatggaagggaaggattctttatggttcttcgt
gttgggtacctacatagaatcctcaactgggatatcggcaataaccgagatcgtgaccaa
tatattccttttgaaaggattacttcaaactatgggcgaagctataattctcgagttcat
gcgcgcatacgcatccattatcgatgttactctctctctttcattgataaggcacatcta
gagaaaggagataaagttcttatgcctgcctctgctcttgatcgtctcacatacatgggc
atcgagtacccgatgttgttcgagttgactaatgcttccgcgggccgagtttctcactgt
ggggttctagaatttgttgcagatgagggcttgatctacttaccgtactggatgatgcag
aacatgcatcttgaagagggagatattgtgcaggtgaaaagtgctagcttagcaaatgca
acctatgtcaagctgcaaccgcatactacggacttcttggatatgtccaaccccaaagca
atcttgaaaactacactgaggaactactcttgcttaaccgtcggcgacacgatcatgatc
ccctacaacaataagaattactatatcaatatagttgaaacaaaaccctaccctgtagtc
agtataattgaaactgattgcaaagtggactttgctcctcttgattataaagaaattgaa
aagccgtctcctccattgcaatcaaacaagaagcttaaagttgaagaagagccgtcgaga
aagcgcatccctttcagtggttcagcaaggcgattggacggtaaaccagctgctccgttg
cttaaacattaccattccgatgttggtagtgaaactgttgcttccaaatcatcaagctct
acttcaagtcaacgtgcttggaagctcgtattcggttcgaatggaaattggccccaaaat
gaaacagaaaaggttgccatgaggaacagtcaagaccgcagcaaaaggaaagagccaact
caagccttcaccgggagaaagtattcactgatatga
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