Hibiscus syriacus (Rose-of-Sharon): 120124617
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Entry
120124617 CDS
T09559
Name
(RefSeq) phytochrome A-like
KO
K12120
phytochrome A
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120124617
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
120124617
NCBI-ProteinID:
XP_038999170
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MSSSRQNHSSSNTERSRHSARIIAQTTVDAKLHADFEESGVSFDYSNSVRVSGDQQTRSS
NVTTAYLHNIQKGKFIQPFGCLLALDENIYNVIAYSENAPEMLTMVSHAVPSVGDHPVLG
IGTDIRTIFTAPSSSALLKALGIGEVSLLNPILVHCKTSGKPFYAIIHRVTGGLIIDFEP
VRPSEVPMTAAGALQSYKLAAKAITQLQSLPSGSMERLCDTMVQEVFKLTGYDRVMTYKF
HDDDNGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVFQDD
KLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNDGDEEGNDTGSEQQQQQKRK
RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAVHVNKELELESLVVEKNILRTQTLLCDM
LMRDAPLGIVSQSPNIMDLVKCDGAALLYKENIWKLGVTPSDSQLNEIASWLSKYHMDST
GLSTDSLYDAGFPGALALGDVVCGMAAVRITSKDILFWFRSHTAGEIRWGGAKHEPGLKD
DDRKMHPRSSFKAFLEVVKKRSLAWKDYEMDAIHSLQLILRNAFIDVKTTDTNANAIHSK
LNDLKLEGMQELEAVTSEIVRLIETATVPILAVDVDGLINGWNMKIAELAGLSVDNAIGK
HLLALVEDSSSETVQKMLFLALQGKEEKNIQFEIKTHGSRTGAGPISLVVNACVNRDLHE
NVVGVCFVAQDVTVQKIVMDKFTKIEGYYKAIVHNPNPLIPPIFGMDEFGWCSEWNPAMT
KLTGWNRDEVVDKMLLGEVFGTNTACCRLKNQESFVNLGVVLNNAVTGNEPEKVPFGFFA
RSGKYVECWLCVNKKLDMEGGAVTGVFCFLQLPSQELQQALHVQKLSEQTAMKRLKALAY
LKTQIRNPLSGIIFSWKMMEDTELGPEQNRLLQTSTMCQRQLRKILDDSDLDSLIEGYMD
LEMIEFTLNEVLIASISQVMTKSTEKGIRMLNDTAAEVMNETLYGDGVRLQQVLADFLLI
SVNFTPNGGQVTVAATLTKDQLGQSVHLAHLKLRITHAGGGIPEALLSQMFGTDGDASEE
GIGLLVGRKLVKLMNGDVQYLREAGRSTFIITIELAAANRSRN
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcaaggcaaaaccattcatcaagcaacacggagagatccaggcacagtgct
cgcatcattgctcaaacgactgtagatgcaaaactccatgcagatttcgaggagtccggc
gtatccttcgattattcgaattcggtgcgtgtaagtggagatcagcaaacgaggtccagc
aacgttaccacggcttatctccataatattcagaaaggcaagtttatccagccctttggg
tgcttgctagctttagatgagaacatttacaatgtcatagcatacagtgagaatgcccct
gagatgttgaccatggttagccatgcagtaccaagtgttggggaccatccggttctcggc
attggaactgacataagaaccatttttactgcccctagttcatctgcattgctaaaggcc
ctaggaatcggggaggtttctcttttgaatccgatcttagtccattgcaagacttctgga
aagcccttttatgccattatccatcgggtaacagggggtttgataattgatttcgagccg
gtcaggccctctgaagttcccatgactgcagccggagctttgcagtcatacaagctcgca
gcaaaggcaatcactcagttgcagtcgctacctagtgggagcatggaaaggctttgtgat
acaatggtgcaggaggttttcaaactcaccggttatgacagggtgatgacatataaattc
catgatgacgacaatggtgaagtgatatctgaggtaacaaaaccgggcttggagccttat
ttgggcttgcattatcctgccaccgatatcccccaggccgctcgattcttgtttatgaag
aataaagtccgtatgatcgttgattgtagagccaaacatgtgaaagtatttcaagatgat
aagcttcctattgacctgaccttgtgtggttcaaccctaagggctccccacagctgccat
ttacagtacatggagaacatgaattccatcgcttctttggtcatggctgtcattgtcaat
gatggagatgaagaaggtaatgacaccggttcggagcagcagcagcaacaaaagagaaag
agattatggggtttagtagtatgccataacaccactcctaggtttgttccatttccactc
aggtatgcctgtgagtttctagctcaagttttcgccgtccatgtcaataaggaattagag
ctcgaaagcctagtcgtcgagaagaacatactgcgcacacagacccttttatgtgacatg
cttatgagggatgcacctctggggattgtatcacagagtccaaatataatggatttggtg
aaatgtgatggggctgccttattatacaaggaaaatatatggaaactaggggtaacccca
agtgattcccaactgaatgagatagcgtcatggctttccaaatatcatatggattccaca
ggtctgagtaccgatagcttgtacgatgccgggtttccaggggctttggctcttggtgat
gtagtatgcggaatggctgcagtgaggataacctccaaagacatacttttctggttccgg
tcccatacggcgggcgaaattcgatggggtggtgcaaagcatgaacctggattgaaagac
gacgaccgaaagatgcacccgaggtcatcattcaaggctttccttgaagttgtcaagaaa
aggagtctggcttggaaggactatgaaatggatgccatccattctttgcagcttattcta
aggaatgcgttcatagatgtcaagaccacggatacaaacgccaatgccatacattccaag
ctgaatgacctcaaactagaagggatgcaagagctggaagcagtgacgagtgagatagtg
cgtttgatcgaaacagcaacagtcccgattttggcagttgatgttgatggcctgattaat
ggttggaatatgaaaatcgcagagttggctggcctttctgttgataatgcaattgggaag
catttactcgctcttgttgaagattcttcatctgaaacagtccagaaaatgttgttcttg
gctctgcagggcaaagaagaaaagaacatacagtttgagatcaaaactcatggatcaagg
actggggcaggtcccattagtttagttgtcaatgcttgtgtaaacagggatcttcatgaa
aatgttgtgggggtatgctttgtggctcaagatgtaacagttcagaagattgtaatggac
aaatttaccaagatcgaaggctattacaaggcaatagtacacaatccaaacccactgatc
cctcccatattcggcatggatgaattcggatggtgttcggagtggaatccggcaatgaca
aagctaaccggttggaaccgagatgaagtggtggataagatgctgttgggggaggttttt
ggaaccaacactgcttgctgtcgtctcaagaaccaagaatcttttgtcaacctcggtgtt
gtacttaacaatgcggtgaccggtaatgaacccgagaaggttcctttcggtttcttcgct
cgcagcgggaagtatgtcgaatgctggttatgtgtgaacaagaaattggacatggaaggc
ggtgctgtcaccggtgtgttctgtttcttgcagctcccaagccaagaactgcaacaagca
cttcatgttcagaaattgtccgagcaaacagccatgaaaagattgaaagcgttggcttat
ttgaaaactcagattcgtaaccctctatctggtattatattttcttggaaaatgatggaa
gacacagagttgggaccggaacaaaatcgccttcttcaaactagtaccatgtgccagcgc
cagcttagaaagatactagatgattcggacctcgatagcctcattgaaggctacatggat
cttgaaatgattgaattcaccttgaatgaggtattgattgcttctattagtcaagtgatg
acaaagagcaccgagaaaggtatccgaatgctcaacgatacagcggcagaagtcatgaat
gagaccttgtacggagatggtgttagacttcaacaagtcttagctgatttcctgttgata
tcagttaattttacaccaaatggaggccaagtcactgttgcagctaccttaaccaaagat
caactaggacaatccgttcatcttgcacatttgaaactaaggataacacatgcaggtggt
ggaatacctgaagcattgctgagccagatgttcggaactgatggggatgcatcggaggaa
ggaatcggtttactcgtgggccgaaaattggtgaaactcatgaatggtgatgtgcagtat
ttaagggaagcaggcagatcaactttcatcatcaccattgaacttgctgcagcaaatagg
tccagaaactga
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