Hibiscus syriacus (Rose-of-Sharon): 120125110
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Entry
120125110 CDS
T09559
Name
(RefSeq) elongation factor Tu, chloroplastic-like
KO
K02358
elongation factor Tu
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120125110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hsyr03012
]
120125110
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120125110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120125110
Translation factors [BR:
hsyr03012
]
Eukaryotic type
Elongation factors
120125110
Prokaryotic type
120125110
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
120125110
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120125110
Exosomal proteins of breast cancer cells
120125110
Exosomal proteins of colorectal cancer cells
120125110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
GTP-eEF1A_C
RsgA_GTPase
cobW
Motif
Other DBs
NCBI-GeneID:
120125110
NCBI-ProteinID:
XP_038999533
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MAISSPAAIAADAKLTYPQASPLPTHSSTTSAVLSSKLIPTQLSSSFLPTFITTVSTSSS
VFPHRRAPFTVKAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYD
EIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSG
ADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEYPGDDV
PIVSGSALLALEALMANPSIPRGENQWVDKIYELMDAVDSYIPVPQRQTDLPFLLAVEDV
FSITGRGTVATGRIERGTIKVGDTVDIVGLKETRNVTVTGVEMFQKILDDAMAGDNVGLL
LRGVQKADIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDV
TGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttcatcaccagcagccatcgccgctgacgctaagcttacatacccacaagcc
tcccctctgcctactcactcctcaaccacctctgcagttctctcctctaaactaatccct
acccaactctcctcttccttcctccctacttttatcaccaccgtctccacctcctcctcc
gtcttcccccaccgccgtgcccctttcaccgtcaaagctgcccgcggcaaattcgaacgc
aaaaagcctcacgtcaacatcggcaccattggtcatgtcgaccatggtaaaaccacattg
accgccgctcttactatggccttagcttccatgggtaacagcgcccccaaaaagtacgac
gaaatcgacgccgccccagaagagcgtgcccgtggtatcaccatcaacaccgccaccgtc
gaatacgaaaccgagaaccgccattacgcccacgtggattgccccggtcacgctgattat
gtcaagaacatgattaccggagctgcccaaatggacggtgccatcttggtcgtttccggc
gccgacggacccatgccccagactaaagagcatatcttgttggctaaacaagtcggtgtc
ccaaacatggtcgtgttcttgaacaaacaagaccaggtcgacgatgaagagcttttgcaa
ttggtcgaattggaggtgcgtgaattgctttctagttacgaatatcctggtgatgatgtg
cctattgtttctggttctgcacttttagctttagaagctttgatggctaatcccagtatt
cccagaggagaaaaccaatgggttgataagatttatgaacttatggatgctgttgatagc
tatattcctgttcctcaaagacaaacagatttacctttcttgttagctgttgaggatgtg
ttttccatcactggccgtggtaccgttgccaccggtcgtatcgagagaggtaccattaag
gtcggagataccgttgacattgttggattgaaggaaactagaaatgtcacagttactgga
gttgaaatgtttcaaaagatactagacgatgccatggctggtgataatgttggattgttg
cttagaggtgttcaaaaggctgatattcagagagggatggttttggctaaaccaggaacg
atcacgccgcataccaagttcagcgccatcgtctatgtgttgaagaaggaagagggcggt
aggcattctccgttcttcgcaggttataggcctcagttttacatgaggaccacagatgtc
accggaaaggtatcttcgattatgaatgataaggatgaagagtctaagatggttatgccc
ggtgaccgtgtaaagatggtagttgagcttattatgccggtggcgtgcgaacaagggatg
cggttcgctattagagaaggagggaagacggtcggagccggtgttattcagtccatcatt
gagtga
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