KEGG   Hibiscus syriacus (Rose-of-Sharon): 120125274
Entry
120125274         CDS       T09559                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120125274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsyr03400]
    120125274
DNA repair and recombination proteins [BR:hsyr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     120125274
SSDB
Motif
Pfam: HD HD_assoc_2 Scabin-like ThiD2
Other DBs
NCBI-GeneID: 120125274
NCBI-ProteinID: XP_038999680
LinkDB
Position
Unknown
AA seq 470 aa
MGTSWNEEVTSCYSLCCRDRRSSKHIRDNVHGNIYLDKFFLKFVDTEQFQRLRDLKQLGL
SHMVYPGAVHSRFEHSLGVYWLADEAVHTIKAHQGSEISIERNDINTVKLAGLLHDVGHG
PFSHLFEREFLPRVLNGSEWSHEDMSVKVIDYIVDEHNIEIDAAMLKNVKDMVLASSANS
FQNTVNEKRFLYDIVANGRNGIDVDKFDYIERDSRACDLGFNFQFQRLMETMRVMEDEIC
YRAKDYLTVHKLFATRADLHRTVYTHAKVKAIELMVVDALTLANGELSISASIHEPAEFW
KLDDSIVKQIETSDKQELKKARDLVWRIRKRDLYQFCNEYIVPKDKQEHFKSITPQDIVC
SQKNGDPPLKEEDIAVSIVKIDLTRGRNNPLESIKFFQDYETDFKFPIRDELISHLLPSF
YQDMIVRVYSKKSELVGAVSKAFENYQLKTYGRKAQVHDTPEKKKSRLRY
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgggaacgagttggaacgaagaagtgacgagctgctactcattgtgctgccgggatcga
cgatcgtccaagcacatccgcgacaacgttcacggcaacatctaccttgataagtttttc
ttaaagtttgttgacacggagcagtttcaaagacttcgcgatctaaagcaacttggtctg
tcgcacatggtgtacccaggagctgttcattctcgctttgagcattcgctgggagtttat
tggcttgctgatgaagctgttcatacaattaaagctcaccaaggttcggagatcagcatt
gagcgtaatgatatcaacacagtaaagcttgctggactattgcatgatgttggacatgga
ccatttagccatctgtttgagcgcgagtttcttccccgggtgcttaatggatctgaatgg
tctcatgaggacatgtcagtgaaggtgattgattacattgttgatgagcacaacattgaa
atagatgctgcaatgcttaagaatgtgaaggacatggtacttgctagctcagcaaattct
tttcaaaatactgtgaacgaaaagcgttttctatacgatattgttgcaaatggtagaaat
ggaatagatgttgataaatttgactatattgaacgcgactctcgtgcttgtgaccttggc
ttcaattttcagtttcagaggttaatggaaacgatgagagtgatggaagacgagatatgc
taccgggcgaaggattatctgactgtccacaagttatttgctactcgagctgatttacat
agaacagtttacacacatgctaaagtaaaggcaatagaactcatggttgtagatgcttta
acattagcaaatggtgaactgagtatatcggcatcaatccatgagccagctgaattttgg
aagttagatgattcaatagtaaaacaaattgaaacctctgataaacaagagctgaagaaa
gcgagagatctggtctggcgcatccggaaaagagacctataccagttctgtaatgagtat
attgttccaaaggacaagcaagagcatttcaagtccatcactcctcaagatattgtttgt
tctcagaaaaatggtgaccccccattgaaagaggaagatattgctgtgagcattgtgaaa
attgacctgactcgcgggaggaataaccctctcgaaagcatcaagtttttccaggattac
gagactgatttcaaatttcctatacgagatgagctcataagtcacctgctgccttcattt
tatcaagatatgattgtcagagtatactccaagaaatctgaactggtaggagcagtttct
aaggcctttgaaaattatcagctaaagacatatggaaggaaagcacaagttcatgatacc
cctgagaagaagaaaagccggcttagatattaa

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