Hibiscus syriacus (Rose-of-Sharon): 120125336
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Entry
120125336 CDS
T09559
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Module
hsyr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120125336
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120125336
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
120125336
NCBI-ProteinID:
XP_038999711
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MALWMDVGKAGRTDHANLILVSRDVSSDDCISVGDKTFHINITDIDCGPGHGISIGSLGM
GGSEAQVENINVMRVNFQETTDGARIKTWQTGKGIVQGETGVQIKAVSYSGLSGTSKTEV
ANNLNCINVVPCSGITLDNILLTPATNEISQLTSSCNNAYGERLVFTIFVTVLHILTPGV
SSALNSFNVMNYGAVGDGRADDSAAFLKAWKAACKAPSRNPSLIIPARKIFLLKPVTFRG
PCKSTSIYILMSGNIVSPNSKMAWKGYHINRWLAFTYVNGLNIVGSGTINGRGHAWWPNP
CLHKVPKGVTCKGPTALTFYRCNGLVLKGIKHINSQRNHITISNCNDVTVSNLHISAPRT
SPNTDGIDISGSTNVWIRNSFIGTGDDCVAISAGSSRINITGIACGPGHGISIGSLGAGE
NEKVEEVQVRNCTFKGTMTGVRIKTWQGSVGYARKITFDKIRFIRADSPIIIDQYYCPDR
VNCKNETMGIKISDVTYSSITGTSITDKVINLSCDHNVGCTNIHFRNVYIKSTVPGKKAY
SFAFNAHGNYTHTRPVVTGLLPEPGHKMAS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcactatggatggacgttggaaaggctggtaggaccgatcatgcaaatttaatcctg
gtcagcagggatgtttcaagtgatgattgtatctctgttggtgataaaactttccacatc
aacatcactgacatcgattgtggtccgggtcatggtataagcatcggaagcctaggcatg
ggtggatcagaggctcaagtagagaatattaatgttatgcgagttaactttcaagagaca
actgatggagctcgaatcaagacatggcagacggggaaaggtatagttcaaggtgaaacc
ggagttcaaatcaaggcagtaagctacagtggattaagtgggacgtcaaagacagaagtg
gcaaacaatctgaattgcatcaatgtggttccatgctcgggcataacattagacaacatt
ctactgacaccggcaactaatgaaatcagccaattgacttcaagctgcaacaatgcgtat
ggagaacgtctggtcttcaccatttttgtcacagttctgcacatcctcacgccaggagta
agcagtgcactgaattcgtttaatgtgatgaattatggagcggtcggagatgggagagct
gacgattctgctgcgtttttgaaagcatggaaagctgcctgcaaagctccatcaagaaat
ccaagccttattataccagcaaggaagatattcttattgaagcctgtgactttcagaggt
ccctgcaagtccacttctatctacatattgatgtcagggaacattgtctcacccaattcc
aaaatggcatggaaaggttatcacattaatagatggcttgccttcacgtatgtaaacgga
cttaacatcgttggatctggcacaattaatggccgagggcatgcttggtggccgaaccct
tgtttgcataaggttccgaagggtgtaacatgcaaaggaccgacggcactgacattttat
aggtgcaatgggcttgtgctcaagggaataaaacatatcaatagccaaagaaaccatatt
actatatccaattgcaacgatgtcaccgtctccaacctgcatataagtgccccgagaaca
agccctaacaccgacggtattgatatatccggttcaaccaatgtttggattcggaattct
ttcatcggcaccggggatgattgtgtagctattagcgcaggttcatcccggatcaacatt
accggcatcgcatgcgggcctgggcatggcatcagcattggatcattgggtgctggtgag
aatgaaaaagtggaggaagtacaggtgcggaattgtacattcaaaggaactatgacagga
gtaagaatcaagacatggcagggaagtgttggatatgcaaggaagatcacatttgacaaa
attaggttcatccgagctgatagtcctattattatcgaccagtactattgtcccgataga
gtgaattgtaaaaacgagacaatgggcattaagatcagcgacgtaacgtacagctccatc
accggaacatcaatcacagacaaggtgatcaatttgagctgcgaccataatgttggatgc
actaacattcactttcgtaacgtctacataaagtccactgttccagggaagaaagcctac
tccttcgccttcaacgctcatggaaactacacccataccaggcctgtcgtcaccggactc
ttacctgaaccaggacacaagatggcatcttga
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