Hibiscus syriacus (Rose-of-Sharon): 120125904
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Entry
120125904 CDS
T09559
Name
(RefSeq) ATP-dependent helicase BRM-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120125904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120125904
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120125904
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120125904
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120125904
Chromatin remodeling factors
BAF complex
120125904
PBAF complex
120125904
GBAF(ncBAF) complex
120125904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
120125904
NCBI-ProteinID:
XP_039000158
LinkDB
All DBs
Position
Unknown
AA seq
2214 aa
AA seq
DB search
MQSGGGGGGGPSRNPGVVPVGRTASTSSAASPTSSSSAVSVPHFGFDSTQQQQQQIASRQ
SLQQQLFKKPEGSDAILTYQVSGLQGMMGGSNFPSSPGSMQSPQQSKKFFDLAQQHASSQ
DSLHRSQAVEQQMLNPAQQAYYQYAYHIAQQQQTLLAHQQAKQAQASSSKNTSEKFGRVE
KQMEQGAVSASEHRNEFKAPAQAPVSKKSMPVNVLRAMQAQQAQQTVQNTGNNQLGMAAQ
LQAWALERNIDLSQPENANLMAQLLMQSKMASQQKANESSMASHSSPMHLSKQQVSSPSV
PSESSLRGNSSNDISAQSGPAKTRQTSIPGPLCSTSTSGVVNNANNIGMQQLAIHGRDNQ
VPLRQTVLHGNGMPLMHPPQSSANISQSADPSLLTKKSLGGTETPQTQCIKQLNRSSPLP
ATPNNDGGSVTNSLSQGGVATKIPQQHSGFTKQQLHVLKAQILAFRRIKKGERTLPLELL
QAIVPPPLELQQLQFPPVGGNIQDRNGGKSIEDQVNHLESKEKVLQAGPSTNGQNATKEE
AYGGDDKATTSIAQMQGVSTTAKGFSSILPSGKDELQSAVFPAKSDQEVERGLPKTAVAS
DFSAERGKTVAPEVAASDGGQIKKPAQVNSAPQPKDLGSARMYHGPLFDFPFFTRKHNSY
GSAMPNGNNNLTLAYDIKDLLFEEGIEVLSKKRSESLRKIGGLLAVNLERKRIRPDLVLR
LQIEEKKLRLIDLQARLRDEVDQQQQEIMAMPDRPYRKFVRLCERQRMELARQVQTTQKV
LREKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHEKMVREFSKRKDDDRNKRMEAL
QNNDVERYREMLIEQQTSTTGDAAERYEVLSSFLTQTEEYLHKLGSKITIAKNQQEVEEA
ANAAAVAARLQGLSEEEVRVAAACAGEEVMIRNQFMEMNAPKDGSSVSKYYNLAHAVNER
VIKQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG
NYGPHLIIVPNAVLVNWKSELHNWLPSLSCIYYVGGKDQRSRLFSQEVLAMKFNVLVTTY
EFIMYDRSKLSKIDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKEL
WSLLNLLLPEVFDNRKSFHDWFSQPFQKEGPTHSAEDDWLETEKKVIIIHRLHQILEPFM
LRRRVEDVEGSLPPKVSIVLKCRMSAIQSAIYDWIKSTGTLRVDPEDEKLRVQKNPLYQA
RVYKILNNRCMELRKTCNHPLLNYPFFNDLSKDFLIKSCGKLWILDRILIKLQRTGHRVL
LFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSESFIFLLSIRAAG
RGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVDKISSQQKEDEL
RSRGTVDFEDDFAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTL
ETLLHDEERYQETVHDVPSLHQVNRMIARSEEEVELFDQMDEELDWIEEMTCHEQIPKWL
RTSTKEVNTTVATLSKKPSKNILFTAGVVGVSNETETERKRGRPKGKKRLNYKEIEDANG
EYSEASSDERNGYSANDEEGETGEFEEDELSGAVGAPPGNKEQSEEDGPLGDNGYEYDQT
SEHIRNNCMLEEGGSSGSSLDSRRPIQMVSPVSPQKFGSLSALDARPSAVARRLHDELEE
GEIAISGDSHIDHQQSESWIHDQEEGEDEQVVQPKIKRKRSIRVRPRHTMERAKKSFTEL
PHLQRGESSLFPSQLDHKFQLQLRIDTETNPTRERNAFRHDPNDSSSKTKRNLPSRKIAN
TSKLHASPNSGRVNMAITSENVGEPSRENRDSKLVNTSGLLNFGVKMSDVIQRKCKNVIS
KLQRRIDKEGQQIIPLLTDLWKRVENSGYMGGSGTNHLDLRKIDQRVDRLEYSGVMELVS
DVQLVLKSCMHFYGFSNEVRSEVRKVHDLFFDLLKIAFPDSDFGEARNALAFSGPVSTPV
SGPSARQVAVNKRQKSINEVESDSSLTQKTLQRRSTHAGEDTRVKVHMPQKESRLGKGSS
ISREQYQHNDNSLLTHPGQLVICKKKRKDREKSTVKPRSGSVGPVSPPSIGRNIRSPGAG
SVSKDARPTQQTTHQQGLLNQPGHPSNSSSGLVGWANPVKKLRTDAGKRRPSLQ
NT seq
6645 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggtggtggtggaggaggtgggcctagccggaaccctggggtggttccggtt
gggcggaccgcgtccacatcatctgcagcttcacccacttcctcgtcatcggccgtttcg
gtccctcacttcgggtttgattcgactcaacagcagcagcagcaaatagcgtctaggcag
tcattacaacaacagctatttaaaaaacctgaaggaagtgatgccatcctaacatatcaa
gtcagtggtcttcaaggtatgatgggtggaagcaattttccttcatctccaggctccatg
caatcacctcaacaatccaagaagttctttgatctggctcaacaacatgcttcttcccag
gatagcctgcataggagtcaagctgttgagcagcaaatgctgaatcctgctcagcaagct
tattatcagtatgcttaccacattgctcagcaacagcagacgcttttagcacatcagcaa
gctaaacaggctcaggcatcatcctctaagaacacatctgagaagtttggtcgtgttgaa
aagcagatggagcaaggagcggtgtcagcttctgagcacagaaatgagttcaaggcacct
gctcaggcgccagttagtaaaaaatcgatgcctgtaaatgttttaagggcaatgcaggcc
caacaagctcagcaaactgttcaaaacacaggaaacaatcaacttggtatggctgcacag
ctgcaggcatgggcacttgagcgcaatattgacctgtcgcaaccagaaaatgccaacttg
atggctcagctactcatgcagtctaagatggcttcccagcaaaaagcaaatgaaagtagc
atggcttctcattcatcacctatgcatttatccaagcagcaggtctcttctccatcagtt
ccaagtgagagttctctccgtggtaattcatctaatgatatatctgcccagtctggccct
gcaaaaaccagacagacaagtataccgggccctctttgctcaacttccacctctggggtg
gttaacaatgctaacaacattggaatgcaacagttggctattcatggccgagataatcaa
gtgcctctgaggcagacagttttgcatggaaatgggatgcctcttatgcatcctccacag
tcatctgcaaatattagccagagtgccgatccatctttgctgacaaaaaaatcattaggt
ggaactgaaacaccgcaaacacaatgtatcaaacaattaaatcgatcttctccactgcct
gctactcctaataatgatggaggatcagttaccaactcactgtcacaagggggagtagct
accaagatcccccagcaacattctggtttcactaaacaacaacttcatgttctcaaagca
caaatactagcatttaggcgcattaagaaaggagaacgtacacttccactggaacttctt
caagccattgttcccccaccacttgagctgcagcagctccaatttcctcctgtaggtgga
aatattcaggacagaaatggtggaaagagtatagaagatcaagtgaatcatttggagtct
aaggagaaagttttgcaggccgggccatctaccaatggacagaatgctactaaagaggaa
gcttatggtggagatgataaagcaactacatcaatagctcaaatgcaaggcgtgtcaacc
actgccaagggattttcttctattttaccttctggaaaagacgaactgcaaagtgccgtg
tttcctgcaaagtctgatcaagaagtagaacgtggtcttccaaaaacagcagtcgctagt
gattttagtgcagagagaggaaagactgttgcaccagaagttgctgcatctgacggaggg
caaattaagaaacctgcacaagtaaactctgctccccagccgaaagaccttggctctgcc
agaatgtatcatggaccattatttgatttccccttcttcactaggaaacacaattcatat
ggctcagctatgcctaacggaaacaataatctgactttggcatatgatatcaaagatctt
ctctttgaggaagggattgaagtccttagcaagaaacgatcagaaagtttaaggaaaatt
ggtggcttattagcagtaaatttggaaaggaaaaggattaggccagatcttgttctgcga
ctgcaaattgaagaaaaaaagctccgacttatagatctgcaggcacgtttaagagatgaa
gttgaccagcagcaacaagagataatggcgatgcctgacagaccatacagaaaatttgtc
cgcttgtgtgagcgtcagcgtatggagttggccagacaagtacaaaccactcagaaggtc
cttagagagaaacaattgaaatccatctttcagtggcgtaagaagctcttggaggctcac
tgggccatccgtgatgcacgaactgctcgtaacaggggagttgccaagtaccatgagaaa
atggtacgggagttttcaaagagaaaagatgatgataggaataaaaggatggaggcctta
cagaataatgatgtcgaaaggtacagagagatgttgattgagcagcagacaagtacaact
ggtgatgctgctgagagatatgaagttctttcatcatttctgacgcagactgaagagtat
cttcacaaattgggaagtaagataactatagccaagaatcagcaggaagtggaggaggca
gcaaatgctgccgctgtcgctgcacggttgcagggtctatcagaagaagaagttagggtt
gcagcagcttgtgctggagaggaagtaatgataagaaatcagtttatggaaatgaatgca
cccaaggatggttcatctgttagcaagtactataatcttgctcatgcggtgaatgaaaga
gtcataaagcaaccatcaatgctacgagctggaacattacgagactatcagcttgttggt
ttgcaatggatgctttctttgtataataataaactaaatggtatcttggcggatgagatg
ggtcttgggaagactgttcaggttatggcattgattgcttatttgatggaattcaaagga
aactatggtccacatcttataattgtcccaaatgctgttctggtaaattggaagagtgag
ctccataactggctgccgtctttgtcatgcatctattatgttggaggaaaagatcagcgt
tcaagattattttctcaagaggttctggcaatgaaatttaatgtcctcgtgacaacttac
gaattcatcatgtatgatcggtcaaaactttctaaaattgattggaagtacatcataatt
gatgaagcacagcggatgaaggacagagaatctgttttagctcgtgatcttgatagatac
cgctgccaaaggcggttacttcttactgggactccattacagaatgacttgaaagaactc
tggtcactgttaaatcttctccttcctgaagtttttgacaatcgcaagtcatttcatgat
tggttttcacaaccatttcaaaaggaaggccctacgcatagtgcagaggatgattggctt
gagacggagaagaaggttatcatcatccaccgacttcatcaaattctggagccttttatg
cttagacgtcgtgttgaagatgtggaaggatcccttcccccaaaggtctcaatagtttta
aaatgcagaatgtcagctattcaaagtgccatttatgattggataaagtcaactgggact
ctacgagttgatcctgaagatgagaagctcagggttcaaaaaaatccgctataccaggct
agggtgtacaaaattttaaataaccggtgtatggagcttcggaagacttgcaatcatcct
ttgcttaattacccatttttcaacgacttatccaaagatttccttataaaatcttgtggg
aaattgtggatactagacaggatcctaataaaactgcagagaactgggcatcgtgtatta
ctcttcagtaccatgacaaagcttctggatatcttggaggaatacttgcagtggaggagg
cttgtctacagacgtattgatggaacaactagcttggaagatcgtgaatcagctattgtt
gacttcaatagccctgactctgaatcctttatattcttactaagcattcgtgcagctgga
cgtggtctaaatcttcaatctgctgacactgttgttatatatgatcctgatccaaatcct
aaaaatgaggaacaagcagtagctagggctcaccgaattggtcaaacaagggaagtcaaa
gtcatttacatggaagcagttgttgacaaaatttctagtcagcaaaaagaggatgaacta
aggagtcgaggtacggttgattttgaggacgattttgctggtaaggatagatatatggga
tctattgagagcctcataaggaataacattcagcagtataaaattgacatggccgatgaa
gtaattaatgctgggcgttttgatcagagaacgacacatgaagagagacgcatgactttg
gaaacattattgcatgacgaggagaggtatcaagaaactgtccatgatgttccttcactg
caccaggtaaatcgcatgatagcaagaagtgaagaagaagttgagttgtttgatcaaatg
gatgaagaactagattggatagaggagatgacttgccatgaacaaatacctaagtggctt
cgaaccagtacaaaagaagtgaatactactgtcgctactttatcaaaaaagccatcaaag
aacattttgtttactgctggtgttgttggtgtctcaaatgaaacggaaacagagagaaaa
cgggggcgacctaaggggaaaaagcgtctgaactacaaggaaatagaagatgctaatggg
gaatactctgaggcaagttctgatgagagaaatggctattctgctaatgatgaagagggt
gaaactggtgaatttgaagaagatgaattaagtggtgccgttggtgcaccgcctggaaat
aaggaacagtcagaagaagacggaccacttggtgataatggttatgagtatgaccagact
tcagaacacattagaaacaattgcatgcttgaagaaggtggttcttcaggatcatcatta
gacagtcgaagaccaatacagatggtgtctcctgtttctcctcagaaatttggatctctt
tctgcattagatgctaggccgagtgctgttgcaagaaggctgcatgatgaacttgaggaa
ggcgaaattgcgatatctggagattctcacatagaccaccagcaatctgaaagttggatt
catgatcaggaggaaggtgaagatgaacaagttgtccagcccaagataaaacgaaagcgt
agtatccgggttcgacctcgtcatactatggaaagggcaaagaaatctttcaccgaactg
cctcatctccaacgtggagaatcatctttgtttccttcgcagctggatcataagttccaa
ttacaacttaggattgatactgaaacaaacccaactcgtgagcgtaatgctttcaggcat
gatccaaatgattcatcttctaaaactaagaggaacttaccttcaagaaaaatagctaat
acatctaagttgcatgcatcacccaattctggtagagtgaacatggctattacttcggaa
aatgttggtgaaccctcgagagagaatcgggacagtaaactggttaatacaagtggtttg
ttgaattttggggtgaagatgtctgatgtcatccaaagaaagtgcaaaaatgtgattagc
aagcttcagaggagaatagataaggagggccaacagattataccacttttaacagatttg
tggaagagggttgaaaactcgggctacatgggtggaagtgggactaatcatttagatttg
cggaagattgatcagcgtgttgacagattagagtacagtggagttatggaacttgtttcg
gatgtacagttggtactaaaaagttgtatgcatttttatgggttttcaaatgaggtcaga
tctgaagtgaggaaagtacatgatctgttttttgacttgttgaagattgcatttccggat
tcagatttcggagaagctagaaatgcacttgctttctctggcccggtatctacccccgtg
tctggtccttctgcaagacaggtagcggttaacaagaggcagaaatcgataaacgaggtg
gagtctgattcaagcctcacacaaaagacattgcagcgcagatccactcatgctggtgag
gacacaagggttaaagtgcatatgccccaaaaggaatcaaggcttgggaaagggagcagt
atttccagggaacagtatcaacataatgataattctcttctaactcatcctgggcagctg
gttatttgcaagaagaagaggaaggatagggaaaagtctacggtaaagcctaggagtgga
tcggttggccctgtttcacccccgagtataggtcgcaacatcaggagcccaggtgcaggt
tcagtttccaaggatgctagaccgacccaacagaccacccatcagcaaggtttgctcaac
cagcctggtcacccatcaaacagttctagtggtctcgttggttgggccaatcccgtgaaa
aaattgagaactgacgccggtaaaaggagaccaagccttcaatga
DBGET
integrated database retrieval system
