Hibiscus syriacus (Rose-of-Sharon): 120125934
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Entry
120125934 CDS
T09559
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120125934
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120125934
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120125934
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Helicases
120125934
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120125934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
FlpD
Motif
Other DBs
NCBI-GeneID:
120125934
NCBI-ProteinID:
XP_039000185
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MPSIALCDLKNKKEKKKIALKNPEIEKKVKKLKEPTIKEEENGLEVKNMKKKRKVSELHL
EEDSETSLEVVKPIDVKVKVKLKLKEKKKKKNKAKVEEEEDGDKEEEDEGETEDPNAISR
FRVSEAVRKKLESKGIESFFPIQAMTFNVILNGTDLVGRARTGQGKTLAFVLPILESLTN
GSAKASRKTGYGRAPSVLVLLPTRELAKQVFEDFEVYGEVSGLTSGCLYGGAPYHTQEMK
LKRGVDIVVGTPGRIKDHIERGNIHLGSLKFRVLDEADEMLRMGFVDDVELILGKVEDAS
KVQTLLFSATLPDWVKGIATRFLKTSKKTVDLVGNEKMKASTSVRHIVLPCSKSARSQLI
PDIIRCYSSGGRTIIFTETKDSASEFSGLLPGSRALHGDIQQAQREVTLNGFRSGKFMTL
VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFDPKRSSISKI
ERESGVKFEHISAPRPVDVAKSAGLEAAKLITEVSDSVIPAFKSVARDLLATSGLSAEDL
LAKALAKAAGYSEIKCRSLLTSMENYVTLLLEARKPIYTLSYVFAVLKRFLPEEKVQSVQ
GLTLTADGTGAVFDVAEEDVEKFLASAENAANVTLEVMKKELPRLQERNQSRGRLGGGQG
GFGDRNGGGGRFSGGRGVRGGFSDRRNDRFPGGGGGRGRYNSKKW
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccttctatagctttatgtgatctgaaaaacaagaaagaaaagaagaaaatcgctcta
aaaaatccagaaatcgagaaaaaagtgaagaaactgaaggaacctacgatcaaggaagag
gaaaatggtttggaggtgaagaatatgaagaagaagcgaaaggtgtcggagctccacttg
gaagaggatagcgagacgagcttggaggtcgttaagccgatagatgtgaaggtgaaggtg
aaactgaaattgaaggagaaaaagaagaagaaaaacaaggccaaggtggaggaagaggaa
gatggagataaagaagaagaagatgaaggtgaaactgaggatccgaatgcgatttcgaga
tttcgggtctcggaagcggttagaaagaaacttgagtcgaaggggatcgagtcgttcttt
cctattcaggccatgactttcaatgttattcttaatggaactgatttggttggccgcgct
cgtactggtcagggtaagacactggcctttgtgttgcctatattggagtctttaaccaac
gggtctgcaaaagcatcaaggaagactggatatggcagggcaccaagtgttctggtactt
ttaccaactagggaattggctaaacaggtttttgaggactttgaagtttatggggaggtt
tcagggttgacatcaggctgcttatatggaggagccccctaccacacccaagagatgaaa
ctgaagagaggagttgatatagttgttgggacaccaggccgcataaaggatcacattgag
agggggaatattcacttaggttcattgaagtttcgagttcttgatgaggcggatgaaatg
ttgagaatgggatttgttgatgatgttgaacttatattaggcaaggtagaggatgcaagt
aaagttcagacacttctttttagtgccaccttgccggactgggtgaagggtattgcaaca
agatttcttaaaacaagtaagaaaactgttgatcttgttggtaatgagaagatgaaagct
agtaccagtgttaggcatattgtcttaccctgttctaagtcagcaagatcacagctgatc
ccagatattatccgttgttatagcagcggtggacgtactattatattcaccgagacaaag
gattctgcttctgagttttccggcttattgcctggatcccgtgctttgcatggggacata
cagcaggcccaacgtgaggtcacccttaatgggttccggtcgggcaaattcatgacatta
gtggctacaaatgtggcagcacgaggattagatatcaatgatgttcagttaattatccag
tgtgagcctcctcgtgatgtagaagcatatattcatcggtctggacgaacagggagagca
ggcaatactggagttgctgtcatgctttttgatcctaaaaggtcaagcatatctaaaata
gaaagagaatctggtgtgaaatttgagcatatatctgctcctcggccagttgatgttgct
aaatctgctggtcttgaagcggcaaaactaataacagaagtctctgacagtgtaattcct
gccttcaagtccgttgctcgggacctattggcaacgtctggtctatcagcagaagatcta
cttgccaaagcactagccaaggctgcaggttattccgaaataaagtgtagatcccttcta
acatcaatggagaattatgttacattacttcttgaagctcgaaaacccatttacacactt
tcgtatgtttttgccgtgttgaaaagattcttgccagaggaaaaggttcagtcagtgcag
ggtctgacccttactgctgatggaacgggtgcagtctttgatgttgcagaagaagatgtg
gaaaaatttcttgctagtgctgaaaatgcagcgaatgttacattagaggtgatgaagaaa
gaattgccacgtttacaagagagaaatcagtcaagagggagactcggtggcggacagggt
ggtttcggtgatcgaaatggtggtggtggtaggttctctggcggcagaggtgtccgagga
ggattttctgatagaagaaatgatagatttccgggtggtggtggtggtcgaggtcgctat
aatagcaagaaatggtga
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