Hibiscus syriacus (Rose-of-Sharon): 120127072
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Entry
120127072 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120127072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120127072
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120127072
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120127072
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120127072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
DUF2779
Motif
Other DBs
NCBI-GeneID:
120127072
NCBI-ProteinID:
XP_039001008
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
MFSPGLKRSKFSSQKERNVGSNPRAPDSPATPLTENRKSADQTSIPDRPRTGTPAPWAPR
LSVLARIPPANKNDKGDGIDPIKPVFVGEFPQVVHDEQTSFLQRRIPADVCISGGMDKGT
CLSWIYXGNKIFIWSYLSFAASKKCVTLELPSDVLGNGVGGRNSYPRNNWLLSVVNWDST
SKVTNRVANHRYSAGIVMCNQKTRAVLYWYDIFADVVPAPVTTYAYPDESWVTSSRNDSN
ATANKHAMSFSGSSSFNSLISSAIPGTRNTCVALACCSSGELWQFYCSPSGIQPNKVHQN
IQSLSSQGPGIGQLVGSKGYPRSMIWRLPNVSISDSNHQFFLLTENEIQCFNIKFFPDLD
VSKLWSQEIVGNDGDLGIKKDLAGQKRIXPLDLQVDDHGKVITVLVATFCKDRVSSSSYT
QYSLLTMQYMSEVNTSDFHERVLEKKAPIQVIIPKARVEDEDFLFSMRLRVGGRPSGSTV
VLSGEGTATVTHYHRNSTRLYQFDLPHDAGKVLDASVLPPTDDGEDGAWVVLTEKAGIWA
IPEKAVLLGGVEPPERSLSRKGSSNEGSALEEKRNLMFASNIAPRRASSDAWDAGGRQLT
GMTGITRRTAQDEESEALLGQFFHEFLISGNVDGSLEKLKSSGAFERGGETNVFVRKSKS
IVDTLAKHWTTTRGAEIVSMGIISAQLMDKQQKHNKFLQFLALSKCHEELCSGQRHSLQI
ILEHGEKLSAIIQLRELQNAISQNSSTGVGLTHSSFENQVSGALWDLIQLVGERARRNTV
LLMDRDNAEVFYSKVSDLEQVFYCLERHLEYIISMEQPVGLQIHRVCELSNACVALFRAA
MDYKNEYHLWYPPPEGLTPWYCQPVVRNGLWSVVSFMFQLLKETSELDMSAKSGFYSHLE
ALAEVLLEASSGAINAKVERGEEQKGLLNEYWSRRDAVLDSLYQQVKGFVEAGYQDLADN
PEESQEEILKKLSSSLLSIAKRHEGYQTMWNICCDLNDSGLLKNLMHESMGPRCGFSYFV
FKQLYEKKQFSKLLRLGEEFQEDLSIFLNHYQDLLWLHELFLHQFSAASETLHVLALSQD
EGSISITEEEIDSDHANPVPTLTDRRRLLNLSKIAAFAGKDADSQVKVKRIEADLKILRL
QEEILEVLPTDDTKQRVEKQLLRPEELIELCLKSGSKELALQVFDVFAWTSSSFSKSHRN
LLEECWKNAVDHDPWSQLYEASVSEGWNDEETVKQLGQTILFKASNRCYGPKAETIEDGF
NEVLPLRQKNAEVAGLKDTQSSVEAILMQHRDFPYAGKLMLTAIMLGCVQGDDVKLEEGV
FSPMV
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccaggactgaaacgaagcaaatttagctcccaaaaggagagaaatgtaggg
tcaaatccaagggcaccagattctccagcaactccactaacagagaaccgtaaatcagct
gaccagacttcgattccagatcgccctagaacaggcactcccgctccttgggcacctcgt
ttgtctgtccttgctagaattccaccagcaaacaagaatgataaaggggacggaatagat
ccaatcaagccagtttttgttggagagtttccacaagttgttcatgatgaacagaccagc
tttttgcagaggcgtatacctgctgatgtttgtatatcaggcggaatggataagggaaca
tgcttatcatggatatatnatgggaacaaaatttttatctggagttatttgtcatttgca
gcttctaagaaatgtgttactcttgaacttccttcagatgttttaggaaatggagttggt
ggaagaaattcctatccccgcaataattggttgctttctgttgtcaattgggatagcacc
tcgaaagtaacaaatagagttgcaaatcatcgctattctgctggtattgtcatgtgtaat
cagaaaacacgagctgttttatattggtatgacatctttgcagatgtggtacctgcccct
gttaccacttatgcatatccagatgaatcatgggtgacttcttcacgtaatgacagtaat
gccaccgcaaacaaacatgcaatgagtttttccggttcaagttcttttaactctttgatt
tcttctgcaattcctggtacccggaatacatgtgttgcccttgcatgttgttccagtggc
gagctttggcaattttactgcagcccaagtggtattcaaccaaataaagtacaccagaac
atacaaagtttgtcatcccaaggccctggcattggtcaacttgttgggagcaagggatat
ccaaggtcaatgatatggcgccttcctaacgtttccatttccgattccaaccaccaattt
tttctactgacagaaaatgaaatacaatgtttcaacatcaagttttttcctgatttagat
gtgtcgaagctttggtctcaggaaattgttggtaatgatggcgatttgggtattaagaag
gatctggcaggacagaaacgaatcntgcctttggatctgcaggtagatgatcatggtaaa
gttattaccgttcttgttgccaccttctgcaaggatcgggttagtagctcaagttacact
caatattctcttttgaccatgcaatatatgtctgaggtgaacacctcagattttcatgaa
agggttttagagaaaaaggctccaatccaagtgataattcctaaagcaagggtagaagac
gaggacttcttattctctatgagacttcgagtagggggcaggccctcaggatcaacagtt
gtactttctggtgaagggactgcaacagtcacccattatcacagaaattctactcggctc
tatcaatttgacttacctcatgatgctgggaaagttcttgatgcttcggttcttccgcct
actgatgatggggaagacggtgcatgggttgtgcttactgagaaagcagggatatgggca
ataccagaaaaggctgttttacttggtggggttgaaccccctgaacgaagcttgtctcgc
aaagggagttcaaacgaaggatctgcactagaagagaaaaggaaccttatgtttgcgagc
aatattgctcctagaagggctagctcagatgcatgggatgctggtggtagacaattgacc
ggtatgactgggattacacgccgaaccgcccaagatgaagaatcagaagctttgctaggt
caatttttccatgagtttctgatatctgggaatgttgatggatcactagaaaaactcaag
agttctggggcatttgaaaggggtggtgaaactaatgtctttgtacggaaaagcaaatca
attgttgacaccttagctaaacactggacaactactagaggtgctgaaattgtttctatg
ggtatcatatcagctcaactcatggataagcagcagaagcataacaaatttctccagttt
cttgctttatccaagtgccacgaggagttatgttctggacagagacattctttgcaaatc
atcttagaacatggtgaaaagctctctgcaattattcaactcagggaactacagaacgcg
atcagccaaaacagttccactggagttggcttaactcattcaagttttgaaaatcaagtt
tcaggagctctttgggatctgattcagttagtaggggagagggccaggcgaaatactgtc
cttctgatggacagagataatgctgaagtgttctatagtaaggtctctgatcttgaacag
gtattttattgcttagaaaggcatctggagtatataatcagcatggagcaaccagttggg
cttcagatccatagggtttgtgaactctctaatgcatgcgttgccctatttcgagctgcc
atggactacaagaatgagtatcacctatggtatccaccaccagagggtttaacaccttgg
tattgtcaaccagtggtacgtaatgggctgtggagcgttgtttctttcatgtttcagctg
ttaaaagaaacatctgaacttgatatgtcagcaaaatcaggattttattctcatctggaa
gcattggctgaagttcttcttgaggcatctagtggtgctataaatgctaaagttgagcga
ggagaagaacaaaaaggtcttctaaatgagtactggagtagaagggatgcagttcttgat
tccctttatcaacaagttaaaggttttgtagaggctggttatcaggacttagctgacaac
ccagaagagagccaagaagaaatccttaaaaaactatcttcaagcctgctgtcaatagca
aaacgacatgaaggctaccagaccatgtggaacatatgttgcgatctcaatgattcagga
ttgctaaaaaatcttatgcatgagagcatgggacctagatgtggattcagttactttgtg
tttaaacaactgtatgaaaaaaagcaattctctaagctgctaaggcttggggaggaattc
caggaagatctatccattttcttaaatcattaccaagatctcctatggcttcatgaatta
ttccttcatcagttttcagcagcttcagaaactcttcatgttttggctctttctcaagac
gagggttctatttcaatcactgaagaggagattgattctgaccatgcaaatccagttcca
acattgactgacaggagacgacttttgaacctctccaagatagctgcctttgcaggtaaa
gatgccgactcacaggtaaaagtgaaacgaatagaagctgatttgaagattttgagattg
caggaagaaattttggaagttctacctactgatgatacaaagcaacgtgttgaaaagcag
ctccttcgccccgaggagctcatagagctgtgtctcaaaagtggaagcaaagagctagct
ctgcaggtttttgatgtatttgcatggacgagctcatcatttagcaagagccataggaac
cttttggaagaatgctggaaaaatgctgtcgatcacgatccttggagccaactctatgaa
gcatccgtatctgaaggttggaatgatgaggagaccgtgaaacaacttggccaaactatc
cttttcaaggcttcaaataggtgttatggtccgaaggcagaaaccattgaagacggattc
aatgaagtgctgccattgagacaaaaaaacgcagaagtagccggtttgaaggatacacaa
tcatctgtggaggcaatattgatgcaacatagggatttcccatatgctggtaagctaatg
ctgactgcgatcatgctaggatgtgtacaaggcgatgatgttaaattagaagagggggtg
ttttccccaatggtatga
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