Hibiscus syriacus (Rose-of-Sharon): 120127164
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Entry
120127164 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 11-like
KO
K20308
trafficking protein particle complex subunit 11
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120127164
Membrane trafficking [BR:
hsyr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120127164
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
TRAPPC13_C
Motif
Other DBs
NCBI-GeneID:
120127164
NCBI-ProteinID:
XP_039001082
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MEEYPEELRSPPVALVALVGCSEQHGAITTHLLSQQPPINTLALPEFSILTHXSPSSSSS
SSPPAGFLKRDWLVKHRTKIPAVVAALFSWDHVSGDPAQWVQVCSDLDDLKAAIRPRNTK
LLLVVVGKLEDISEDRLLALRKRAEVDSKYLLLYNPDPSQLYNSLQRLSVSFAELGAIFY
KDKGRRIKARIEKKNFPTPDLQVRYCFKVAVYAEFQPDWAEALRFYEDAYHALLGMVATL
TRLPPIQQLYEIKIVAEHLHFKICTLLLHGGKINEAVAWFRQHIGSYKTLVAAPEVIFLH
WEWLSRQFLVFAELLDSSSATLPSASSQPLGTADQPLNEWEFHPAYYYQSAAQYMKEKRS
ALELAVSNSETSNENDDGSAESVVPSVYIGQFARLLEQGDDSAILSITDDECTRYVIDEG
KTFQDSFEIIALLKKCNEMYSNRKFQRMGSLCAFQIAREYFSLGDFSNAKQFFDGIANLY
RQEGWVTLLWEVLGYLRECSRKQRAIKEFIEFSLQMAALPVSMVDSIQSSKCGPGGPASL
EQRELIHREIFAFISGEARPESLNGLDDLKLTGDNTLHLEIDLVSPLRSVLLASVAFHEQ
IIKSGVSSSITISLLSHLPVSIEIDQLEVQFNQSQCNFIIVNAQKHPLEAPQIEQHDHRM
ESAPSLALVSNKWLRLTYDIKSEQSGKLECISIIAKMGPYLICCRAESPXSMDDLPLWKF
ENHVETFPTKDPALSFSGRKAAQVEEPDPQVDVILGASGPALVGERFLVPVTIASRGHAV
YAGEMKINLVDVRGGDLFSPRESESLSLDTHHVELLGIVGSEREDESQMGSDKIMKIQQS
FGLVPVPFLKIGESWSCKLEIMWHXPKPIMLFVSLGYSPISFELNAQKVNVHKTVQIEGK
DAVLISQRFMLPFRRDSLLLSKIKPAPDSNQFSSLPLHESTVLVVSAKNCSEVTLQLLSM
AIKVDDGAAEKSCSIQHGNEDLGNVVLVPGEKFKKVFYVIPNLDSSKLRLGTVYLKWKRH
CGIEDRSDLTVINSKVVTKHELPEVRVELSPIILTLECPPYAILGDPFMYHVKIRNQTDL
LQEVKFSLADSQSFVLSGSHSDMVFVLPETEHILCYKVVPLVSGLQQLPRISLTTVRYSA
RFQPSIDSCNVFVFPSKPLCNMVGITEKRVEEPAVAD
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtatccagaagaattgaggagtccaccagtggcgctggtagcgttggtaggt
tgctcagagcagcatggtgcgataaccacccatctcctctcccagcagcctcctatcaac
accctcgccttgcccgaattctctatactcacccatncttctccaagctcctcctcttcc
tcctctccaccggccggatttttgaaaagggattggctggttaagcaccggaccaagatc
cccgccgttgtggcagccctcttctcctgggatcatgtgtccggtgaccctgcacaatgg
gtccaagtctgctccgatctggatgacctaaaagccgccattcgtccaagaaacaccaaa
ttgcttctcgtggtggtgggcaaattggaggacattagtgaagatcgtctccttgcctta
cggaagcgagcagaggttgattccaagtatcttctcctctataacccggatccttcccaa
ctatataactctcttcaaaggttgagcgttagttttgccgaactaggagctatattttac
aaagacaaaggtcgaaggattaaagctcgcattgaaaagaagaactttcccactcccgac
ctccaagttcgctactgtttcaaagttgctgtatatgcagagttccaaccagactgggct
gaagccttgaggttctatgaggatgcctatcatgctctgcttgggatggttgctacctta
acaagattgcctcccatacaacagttatatgagatcaaaattgttgctgaacacttgcat
ttcaagatttgcactttgttgttgcatggtggaaagatcaacgaagcagtcgcatggttc
cgccagcacattggctcctacaagacccttgttgcagctccagaagtcatttttcttcac
tgggagtggctcagcaggcaatttttggtttttgctgagttgcttgactcaagctctgct
actcttccgagtgcttcctctcagccattaggcactgccgaccaacctctaaatgaatgg
gaattccatccagcttattactatcagtcagcagctcaatacatgaaagaaaagagatct
gctttggagttggcagtgtcaaattcagaaacttctaatgagaatgatgatggaagtgct
gaatctgtggtaccgtcagtttatattggtcagtttgctcggctacttgagcaaggggat
gattcagctatactgtccattaccgatgatgaatgcacccgttacgtgattgacgaggga
aaaacgtttcaggactcctttgaaattattgccttgctcaaaaagtgtaatgaaatgtat
agtaatcgtaaatttcagaggatgggttcactttgtgcctttcagattgctagagaatat
ttttctttgggtgatttcagcaatgcaaaacagttttttgatgggattgcaaatctatat
aggcaagaaggatgggttactttgttgtgggaggttttgggctacttgagagagtgctca
aggaaacaacgtgcgataaaagagttcatagagttctctcttcaaatggctgcattgcca
gtatctatggtcgatagcatccagtcctccaaatgtggtcctggaggacctgcaagtctt
gaacagagagaactgatacacagagaaatttttgcattcataagtggggaagctagacca
gaatccctcaatggacttgatgatctcaaattaaccggagataatacccttcatcttgag
attgatctcgttagtccactcagatctgtacttcttgcttcagtggcttttcatgaacag
ataattaagtctggtgtctcctcctccattacaatatcacttctatcacatttacccgtt
tccattgagattgatcagctggaagtccaatttaatcaatctcaatgtaattttatcatc
gtgaatgcccaaaaacatccattagaagcaccacagattgagcaacatgatcatcgaatg
gagagtgctccttctttagcacttgtttcaaacaaatggctgcggctgacttatgacatc
aaatctgaacaaagtggaaagcttgaatgcatatctattattgcaaaaatgggaccctac
ttgatctgctgcagagctgaaagtcctncttcaatggatgatttacctctttggaagttt
gaaaaccatgtagaaactttccccacaaaagatcctgctctatcattctctggccggaag
gctgctcaggttgaagaacctgacccacaagtggatgttattcttggtgcttctggccct
gcattagttggagagagatttctggtaccagttaccatagcctccaggggccatgccgtc
tacgctggtgaaatgaagataaatcttgtggatgtgagaggaggtgacctgtttagtcct
agggaatctgagtctctttcactggatactcaccatgttgagcttcttggcattgttgga
tcagaacgggaagatgaatctcaaatgggctctgataaaatcatgaaaattcaacaatct
ttcggattggttcctgttccgtttctaaagattggagaatcatggtcatgcaaactagaa
atcatgtggcactgacccaaaccaattatgctttttgtttcattgggctactccccgatt
tcttttgagttgaatgcacaaaaagtcaatgttcacaagacagtgcaaatcgaaggaaag
gatgctgttttaattagccaacgttttatgctgcctttccgcagggattccttgttgctt
tcaaagatcaagccggcccctgattccaatcagttttcatccctacccctgcatgaatca
actgtacttgttgttagtgctaagaactgctctgaggtcacattgcagctactatcaatg
gctattaaagttgatgatggtgcagctgaaaagtcatgttccatccaacacggcaatgaa
gatcttggcaatgtggttcttgtgcctggagaaaaattcaagaaagttttctatgttatt
cctaatctcgattcctcgaagcttagactggggacagtgtatctaaaatggaagaggcat
tgtggaattgaagatagatctgatttgactgtgatcaattccaaggttgtaactaaacac
gaactccccgaggtacgtgtagagttgtcaccgattattctgactttggaatgtcctcct
tatgccatccttggagatcccttcatgtaccatgttaaaatccgtaaccaaaccgattta
cttcaggaggttaagttttcattggcagattcgcaaagttttgtgttatctgggtctcac
agtgacatggtgtttgttcttccagaaacggagcacatcctttgttacaaagtagtgcct
cttgtctcaggtttgcaacagttgcctagaatatcattgacaactgtgagatactctgct
cgatttcagccctccattgattcatgtaatgttttcgttttcccttccaagccactttgc
aacatggtaggtataacagaaaaaagggtggaggagcccgctgtagcagactaa
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integrated database retrieval system
