Hibiscus syriacus (Rose-of-Sharon): 120127282
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Entry
120127282 CDS
T09559
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120127282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120127282
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
120127282
Complex B
120127282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
DUF4523
RRM_occluded
Calcipressin
Motif
Other DBs
NCBI-GeneID:
120127282
NCBI-ProteinID:
XP_039001156
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MADVSQGQGEEIPPNMTLYINNLNEKIKIDQLKKSLHAVFSQFGKILDVLAFKTLKHKGQ
AWVIFEDVSSATNALRRMQGFPFYDKEMRIQYAKTKSDVIAKADGTFVPREKRKRHEEKG
GKKRKEQLDPNQAAAGLNPGYAGATPPLSQLPYLGARPIVPEAPAPPNNILFIQNLPHDA
TTMMLQMLFNQYPDFILTYIWLKDFFYVQLVITGYGLSFYHSNTNYLPDCTYVSDMPCDF
VGHVRRRRMRLCRPYDFLGYAWLSMLLRGLAKTCRHQCVFKGPRPGWQRDFGTLCSIHPI
PQNNFYTTLFEELFFPSALS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaagtcagggtcagggagaagaaattcctccgaatatgactttatacatc
aacaatctcaatgagaagatcaaaatcgaccagttgaagaagtcgttgcacgctgtgttc
tcacaattcggaaagatactggatgtgttagcattcaagacgctgaaacacaaaggtcaa
gcttgggttattttcgaggatgttagctccgctaccaatgctcttaggcgaatgcagggc
tttcccttttatgacaaggagatgagaatacaatatgcaaagactaaatcagatgtaata
gcaaaagcagatggcacttttgtaccccgagagaagcgaaagaggcatgaagaaaaggga
gggaagaaacggaaagagcaacttgatcctaatcaagcagcagcaggtttgaatccaggt
tatgcgggtgcaacacctcctctatcacaattaccctacctgggtgctagaccaattgtt
ccagaagctcccgcgccaccaaataacattctgtttattcagaatcttcctcatgatgca
accacaatgatgctgcaaatgctcttcaatcaataccccgatttcattcttacatatata
tggttgaaagattttttttatgttcaacttgttattacagggtatgggttaagcttttat
cattcgaataccaactacctacctgactgcacctacgtgagtgacatgccatgcgacttt
gtcggccacgtgagaaggagacgcatgcgactttgccgaccatacgacttcctcggctac
gcatggctttccatgcttcttcgagggttggcaaaaacgtgtcgacaccaatgcgtcttc
aaggggcctcggccaggatggcaacgcgacttcgggacactctgtagcattcatcctatt
ccacaaaataatttctacacaacattattcgaagaattattttttccgagtgcattatct
taa
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