Hibiscus syriacus (Rose-of-Sharon): 120127415
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Entry
120127415 CDS
T09559
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 13
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120127415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120127415
Ion channels [BR:
hsyr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120127415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
120127415
NCBI-ProteinID:
XP_039001261
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MKLPQKLAEILTFRRDKFVRFHDWSSDDGSFTMKLRPSFGAVMDRVRWVFKNWSERIRSF
KKPIIFCSLGKKRPRKDNGMGTRKRILNPQGEFLQTWNKMFLLSCAVALAVDPLFFYIPV
VDDFKKCLDLDKRLGIIASVLRSFVDAFYIIHIVFQFRTAFIAPSSRVFGRGELIDDPRA
IAKRYLCKNFFIDILAILPLPQVVVVIIIPALKGPVSLVTKELLESIIFCQYVPRIIRII
PLFKEVTSTSGILTETAWAGAALNLFLYMLASHAVGAFWYLFSIERQDRCWRNALGSGDK
SALYCFKETNSARNETLVNLLNTTCPLTNPDDINGTDVFNFGIFIDVLDSGLVGTMDYPK
KFFYCFWWGLRNLSSLGQNLKTSTFELEILFAIAISIGGLILFALLIGNMQKYLQSTGVR
VEEMRVKRQDAEQWMSHRMLPENLRERIRRYEQYKWQETRGVEEETLIANLPRDLRRDIK
RHLCLDLLKRVPMFDKMDERLLDAMCDRLKPVLYTDKSYILREGDPVEEMLFIIRGNLIS
TTTNGGRTGFFNLANLKAGDFCGDDLLTWALDPQSSSNLPISTRTVLAQKEVEAFALMAD
DLKFVASQFQRLSSKQFMHTFKYYSVRWQTWAAAFIQAAWRRHCKRKLVKSLREAEEEAL
SKESEASASLGATLYASKFAVNALRMLRSNGSQSARLAQRLSPLLPQKPAEPDFSVEE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaccccagaaattggctgaaatcttgactttccggcgagacaaatttgtaagg
ttccacgattggagttcagatgatggatcgtttacaatgaaacttaggccatcatttggt
gctgttatggatcgtgtccggtgggtattcaagaattggtctgaaaggattagaagcttc
aaaaaaccaataatcttttgttctttgggcaaaaaacgaccaagaaaagacaatggaatg
ggtaccaggaagaggattcttaatccacaaggagagtttcttcagacatggaacaaaatg
ttccttctctcgtgtgctgttgctctggctgttgatcctttgtttttctacatccctgtg
gttgatgacttcaagaagtgccttgacttggataaaagactggggattattgccagcgtc
ctccgttcattcgtcgatgccttttatataattcacatcgtctttcaattccgcaccgca
ttcattgccccatcttctcgtgttttcggtaggggtgagttgattgatgatcccagggct
atcgcaaagcgatatttgtgcaagaacttcttcatcgatattctggcaattcttccactt
ccgcaggtggtagtcgtaatcataattcctgcgttgaaaggcccggtttctttggtcaca
aaggagttgttggaatccattattttctgccaatacgtgccgagaatcattcgaatcatc
cctcttttcaaagaagttacgagcacttccggtatacttactgaaacagcatgggctggt
gctgctttgaatctcttcctctacatgctagccagtcatgcagtcggagccttttggtac
ttgttctcgatcgaacgacaagacaggtgctggcgcaatgctctaggcagtggtgacaaa
agcgctctgtactgttttaaagaaacaaactcggctagaaacgagacattagtgaatctg
ctgaatactacttgtcctttaaccaatcccgatgacataaacggtaccgatgtcttcaac
ttcgggatattcatcgatgtacttgattctggtttggtcggaacgatggattacccgaaa
aagttcttttactgtttctggtggggtttgcgtaatctaagttctttaggccaaaatctc
aaaacaagcactttcgagcttgagatactatttgctattgctatttccattggtgggttg
attctgtttgcattgcttatcgggaatatgcagaaatatctgcaatcaacaggagtcaga
gtggaggaaatgagagtgaaaaggcaagatgcagagcaatggatgtcccacagaatgctt
cccgagaacctgagagaacgcataaggcgatacgaacagtacaaatggcaagaaaccaga
ggcgtcgaagaggagactctcattgctaaccttcccagagatctcaggagagatataaaa
agacatctttgcttggatcttctcaaaagagtgccgatgtttgacaaaatggatgaacga
ctattagatgcaatgtgtgatcgtttgaagccggtgctttacaccgacaagagctacatt
cttcgagaaggggatccggtggaggagatgctgtttatcatccgagggaatctgataagt
acgaccaccaatggtggaagaaccggtttctttaacttggctaatctcaaggctggtgac
ttttgcggtgatgatcttcttacttgggccttggatccccagtcatcgtccaacctaccg
atttcgacaagaacggtgctggcacagaaagaagttgaagctttcgctctgatggcagat
gacttgaagtttgtggcctcacagtttcaacgcctttccagcaagcagttcatgcacact
ttcaagtactactccgtgcgatggcagacatgggcggcagcatttatacaagcagcttgg
cgccggcactgcaagaggaagctcgtaaaatctctacgcgaagcagaggaagaggctttg
agcaaagagagtgaagcctcggcaagccttggtgccactctttacgcatcaaaattcgct
gtgaatgctttacgaatgctgcggagcaatgggtcacaaagcgccagattggctcaaaga
ttgtcgcccttgcttcctcaaaagccagccgagcctgattttagtgttgaagaataa
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