Hibiscus syriacus (Rose-of-Sharon): 120127436
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Entry
120127436 CDS
T09559
Name
(RefSeq) BRCT domain-containing protein At4g02110-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120127436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsyr03032
]
120127436
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120127436
DNA replication proteins [BR:
hsyr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
120127436
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
120127436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
RTT107_BRCT_5
BRCT_2
PHD
Motif
Other DBs
NCBI-GeneID:
120127436
NCBI-ProteinID:
XP_039001275
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MLESDTPSKTFLGVRFCLYGFDPVNEHEVRVKLITGGGVGVGQCNQNCTHLIVDKIVYDD
PVCVDALNDGKTVVTGLWVDHSFDVGMPLDATSIMYRPLRDLDGIPGAKSLIVCLTGYQR
QDRDDIMTMVSLMGAQFSKPLVASKVTHLICYKFEGEKYELAKKIKKIKLINHRWLEDCI
REWEILSEANYSKSGYELEIMEAEAKDSDEEAEETTLKHSGQQSMNRSPHNLRAEMLSSR
ELPATVEVSTSTMPKHSPNTKEVLVTPEKFHQGTSINNASSTKLAQPGNRSPNSTNMDNY
LEPTSKSPSLSNQMFTGISYSRKTPSKSSRTSTLPNLSREESGNNSGSPQAMKIKNVSDV
SSSKMQQPEERTGSCFDRSPWKGSDLCHANDSAGILPQKRALELSCSSSKSQKTSNAKAS
VKGSALDTERWERRSLGEQPQINDYSVNETGCLNSLHSSCAKLLTDLFSSETVTPEDRQR
SSDEKSPGMSFRGYRVSTFAGKPDMQNEIAYEKSPHMSFTELRESTPASRSNIEDYSQEQ
AQVGGEPGVLQNKQQVVEVASLDDRKLRNENSHSPSNLVVLEGGNDKSVRKSVSKKLAKL
TKPVNKPDMQSENAGEESPQMSFKGLRETTSASRSNIKEYGLEQLQVVGEHNELKNKQQD
VEVPSFDERKPGNEGSHSPSDLNVLERGNDKSTTKPVTKKLKKKTLGSRPKLSNIANRKG
SIYSSKISSENRSTISLDGESKRATHKSASEHETSPPTINLDSAKDIKIVAKCQTSVTSK
TQFMDDETQAPDEEDENDPKTAEKEKSELVELMGKVDTFVEVEHVSHDSNVAQDGSSIAP
ENGTNGTDPERAADSKNSELGEPTLMCGGLKKKANKRIKQPAGRAMMKADPSNSTNNLVG
QNSSVPKNVEEKENEKENFMLHSAAKPKGNIASSKVEISGAAGKSSPVCHVEVSGKSIGK
SSNRTVKTNEKFQKVDSNRQPLQKVLDRVKNEPICFILSGHRLQRKEFQQVIRRLKGKFC
RDSHQWSYQATHFIAPDPVRRTEKFFAAAASGRWILKSDYLSACNQAGKFLAEEPYEWHK
KGLSEDGAINLEAPRKWRQLRERTGHGAFYGMRIIVYGECIAPPLDTLKRVVKAGDGDIL
ATSPPYTRFLKSGVHFAVVSPGMPRVDMWVQEFLKHEVPCVVADYLVEYVCKPGYSLERH
VLYNTLEWAEKSSSNLTSRAEEIVEDSTPDESPNHTEGNDITCQVCGSGDRGEVMLICGD
EKGSVGCGVGTHIDCCDPPLDAIPEEDWFCPKCSRSNINKTSSSKKRKKGASRPKGR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgctggaatccgatactccctcgaaaacgtttctcggcgttcgtttttgtctttacggc
ttcgatcccgtcaacgagcatgaggttcgagtaaagctcattaccggcggcggcgttggt
gtgggtcagtgtaaccagaattgcactcatttgattgttgataagattgtatacgatgat
cctgtatgtgttgatgctctaaatgatggcaaaacagttgtcactggattatgggttgat
catagttttgatgtcggaatgcctcttgatgctacttcgattatgtacagacctcttagg
gacttagatggaattcctggtgctaaaagtttaattgtatgcttgactggataccagagg
caagatcgagatgacattatgacaatggttagcttgatgggtgctcaattttctaaacct
ctggttgcaagcaaagtcactcatctaatatgttataaattcgaaggagagaagtatgag
cttgctaagaaaatcaagaagataaagcttatcaatcaccgctggttggaagattgtata
agagaatgggaaattctttcagaagctaactatagcaagagtggttatgagttagagata
atggaagctgaagccaaagattctgatgaagaggctgaagaaactacattgaagcattct
gggcaacagagtatgaataggagccctcataatttgagagctgaaatgctcagttcccgt
gaattgcccgcaactgttgaagtgtcaacttcgactatgcccaaacattcaccaaatacc
aaggaagttttagtgacacctgagaagtttcatcaaggcacaagcatcaataatgcttca
tctactaagctagctcaaccaggcaacagaagcccaaattctacaaatatggataattac
ttggaacctacctctaagagcccctcgttatccaatcagatgttcactggcataagttac
tcaaggaaaacaccaagcaaatcatcaagaacttctacgcttccaaatttatctagggag
gaatctggaaacaatagtggctctcctcaagctatgaaaatcaagaatgtatctgatgtt
tcttcctctaaaatgcagcaaccagaggaaagaactggttcttgttttgatagatctcca
tggaaaggaagtgatctgtgccatgccaacgactcagctggtatattgcctcagaaaaga
gctttggaactttcttgtagtagctctaaatcacaaaagacgagtaatgcaaaagcttct
gtcaagggcagcgcactagatactgaacgatgggaacggagatccctgggtgaacagccg
cagattaacgactactcagtgaatgagactggttgtctgaatagtttacatagttcatgt
gccaagttgttgactgatcttttttcctctgaaactgttactcctgaggacagacagaga
agtagtgatgagaagtctcctggcatgtcctttagggggtatagagtgtccacctttgca
ggtaagccagatatgcaaaatgagattgcttatgagaagtcaccacatatgtctttcacg
gaattaagagagtccaccccagcaagcagatcaaatattgaagattacagccaagaacag
gcacaagtgggcggagagccaggtgtgctgcagaataagcagcaagttgttgaggtggct
tcacttgatgatagaaaactgcggaatgaaaattctcatagcccttctaatttggttgtg
cttgaaggaggaaatgataagtcagtgagaaaatcagttagcaagaagcttgcaaaactg
acaaaaccggtgaacaagccagatatgcaaagtgagaatgctggtgaggaatcaccccaa
atgtccttcaagggattaagagagaccacctctgcaagcagatcaaatatcaaagaatac
ggcttagaacaattacaagttgttggagagcacaatgagctgaagaataagcagcaagat
gttgaggttccttcatttgatgaaagaaagccaggaaatgaaggttcccatagcccttct
gacttgaatgtgcttgaacgaggaaatgataagtcaacgacaaaaccagttaccaagaag
cttaagaaaaagaccttgggttctcgaccaaaactaagtaacattgctaacagaaaaggt
tctatttactctagcaaaatttcttcggaaaatcgttctacaatttccttggatggtgag
agtaaaagagcaactcataagagtgccagtgagcatgagacatcccctccaactattaac
ctggattcagctaaggatatcaaaatagttgcaaaatgtcaaacttccgttactagtaag
actcaattcatggatgatgaaactcaagctccagatgaggaagatgaaaatgatcctaag
acagctgaaaaagagaagtccgagttggttgaattgatgggtaaagtagatacatttgta
gaagtggaacatgtcagccatgattccaatgtggctcaagatgggagttcaattgccccg
gagaatggaacaaatggaactgatcctgagagggcagctgatagcaagaattctgaatta
ggtgaaccaactttgatgtgtggtggtttgaaaaagaaagcaaacaaaaggattaaacag
cctgccggtagagccatgatgaaggctgatccttctaattccacaaacaatttggttggg
caaaatagtagtgtcccgaagaacgttgaggagaaagaaaatgaaaaagagaatttcatg
ctacattctgctgccaaaccaaaaggcaacattgcatcttcgaaagtggaaatatctggg
gcagcaggcaagagtagcccagtctgtcacgtggaggtttctgggaaatcaattggtaaa
tccagcaacagaacagtgaagactaatgaaaaattccagaaggttgactctaacaggcaa
ccgctgcaaaaggttttggacagagtgaaaaatgagcctatatgttttatattaagtggc
cacagactgcagagaaaagaatttcagcaagtcattcggcgattgaaaggcaaattttgt
agagactctcatcaatggtcataccaggcaacacatttcattgccccagatccagttcgt
aggactgaaaaattctttgctgctgctgcatctggaaggtggattcttaagtctgattat
ttaagtgcttgtaatcaggcaggaaaattcttggcagaggagccttatgaatggcacaaa
aaaggcctcagtgaagatggtgcaataaacttagaggctccaaggaagtggcgtcagtta
cgggagagaacaggacatggagcattttatggaatgcgcattattgtatatggagaatgc
attgctccccctttggatactttgaagcgtgtggtgaaagccggggatggtgatatttta
gcaacatcccccccttacacaagattcctcaaatctggcgtccatttcgctgttgttagc
cctggcatgccacgtgttgatatgtgggttcaagagtttttaaaacatgaggtaccctgt
gttgttgccgactacctagtggaatatgtatgtaaacctggttactccctggagagacat
gttctatacaacacactcgaatgggcagagaagtcgagtagtaacttgacaagccgagcc
gaagagattgttgaggactcgaccccagatgagtcaccaaatcacacggaaggtaatgat
ataacatgccaagtttgcggctctggtgacagaggagaggtcatgctgatctgcggtgat
gaaaaaggttcagtaggttgtggagttggcactcacattgattgttgtgatcctccgctc
gacgctattcctgaggaggactggttttgtcccaagtgtagcagaagcaacataaacaaa
acgtcttcttccaagaaaaggaaaaagggtgcctctcggccaaagggcaggtaa
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