Hibiscus syriacus (Rose-of-Sharon): 120127840
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Entry
120127840 CDS
T09559
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120127840
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
120127840
Transfer RNA biogenesis [BR:
hsyr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
120127840
Prokaryotic type
120127840
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
120127840
NCBI-ProteinID:
XP_039001583
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MDTHDTMPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHICLSRVCSETVGGLPGL
LLTLAGMGDGLSVNIWGPSNLNLLVDAMKCFIPHHAMVHTNLISHTGPLQVDSFHNCASV
ASNFKDVKISAILLQPNGVEDSDVKPSDVSVIYVCELNESKGKFHKEKADALGIKVKTKF
RELTEGKSVKSDLLDITVHPSDVMGAPVPGPVVIIVDCPTDSHAQKLTSTQSLNDYYSDS
SCQSQSCKIVNCVIHLGPASVVSSSHYKKWMNKFSSAQHVMAGYAMNKVQNPILKSSARI
TTRLSYLCPQLFPLMSSTSDHDFTQEDLTSKLCNGVFAENLLKFILRPHARLGLDRSDVP
SPLAASAVIDELLLEIPDIIDATQHVSQLWQKPTATNKCAISFQDSKGLIDEPILDENSH
PCCLENIRRDDLEITFLGTGSSQPSKYRNVTAIYFNLFSNGSLLLDCGEGTLAQLKRRYG
SEGAENAVRHLACVWISHIHADHHVGLVRILTLRRDLLKGVPHDPLIVIGPSHLNLFLDA
YQRLEDLDMQFLDNKSTTVTSWETFNFDNESNKTITSTSCLEESCLQGSSKRMKLSIPID
NVATSALLTRLKKVLNKAGLERIISFPVVHCPEAFGVILKAADRINSVGKVIPGWKVVYS
GDTRPCSETIEASEGAAILIHEATFEDGMAGEAIAKNHSTTKEAIDVGNSADAYRIILTH
FSQRYPKIPVLDELSMHKTCIAFDLMTINIADLHVLPEVIPYLKLLFRTEMLIDDSDDHI
VEADL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggatactcacgatacaatgccttcggttttacttttctttgacaagcaaaggtttatc
tttaatgccggagagggcttacaacgtttttgcaccgaacataagattaaactatcaaag
atagatcatatatgcctttcccgtgtttgctcagagacagttggaggacttccaggtttg
cttttgactttggctggcatgggagatggactgtctgttaacatatggggtccttcgaat
ctcaacttattggtcgatgctatgaagtgcttcatccctcatcatgccatggttcacacc
aatctcatctctcatactggccctcttcaagtggacagctttcacaactgtgcgtcagta
gcaagcaactttaaagatgttaaaatatcagccattctcttgcagccgaatggggtcgaa
gattctgatgtaaagccaagtgatgtgtcagtgatatacgtgtgtgaattaaatgagagt
aaggggaaattccacaaagaaaaagctgatgctcttggcataaaagttaagacaaagttt
agggaattgactgaaggaaaatcagtcaagtcagatttgttagatatcacagttcatccc
agtgatgtaatgggtgctcctgtccctggtcccgttgtgattatagttgactgtccaact
gattctcatgcacaaaaacttacctccacgcaatctcttaatgattattattcagattca
agttgccagtcacagagctgcaagattgtgaattgtgttattcatttaggccctgcttct
gttgtcagtagttcccactacaagaaatggatgaacaagtttagttcagcacagcatgtt
atggctggatatgcaatgaacaaagtacaaaatccaatcctaaaatcaagtgcaagaatc
accacgcgccttagttacttatgtcctcaattatttccactcatgtcttcaacatcagac
cacgattttacacaagaggatttgacttcaaagctttgtaatggcgtctttgcagaaaat
ctcctaaagtttattttgcgccctcacgctcgtcttggattagatagatccgatgttcca
agtccactggcagcatcagcagtcattgatgagttacttttagagattccagatataata
gatgctacacaacatgtaagccagttgtggcagaaacctacagcaacaaacaagtgtgca
atctcttttcaagatagtaaaggtttgattgacgaaccaatcttggatgaaaatagccat
ccttgttgtctggaaaatatacgaagagacgatcttgagattacatttctagggactggt
tcctcgcaaccgtctaagtatcgcaatgtcactgctatctatttcaatcttttctctaat
ggaagtctgctcctagattgtggagaaggaaccttggcacaactaaaaagaagatatggc
agtgagggtgctgaaaatgctgtaagacatcttgcttgtgtttggatttctcacatccat
gctgatcaccatgtaggcttagttcggattcttaccctgagacgcgatttgttgaaggga
gtgccacatgatccattgattgttatagggccatcacatcttaatctatttttagatgca
taccagagacttgaagatctagatatgcagttcttggataataaatccacaactgtaact
tcatgggaaactttcaacttcgataacgaatcaaacaaaacaattacgtcaacttcatgt
ctcgaagaaagttgtttgcaaggcagttcgaaacgaatgaaactcagtattccgattgac
aatgttgcaacttctgctttactaacccgtctgaagaaagttctcaacaaagcagggctt
gaaaggatcatcagttttcctgtcgtgcactgccccgaggctttcggtgtcatcctgaaa
gcggcggatagaataaatagtgttggaaaagtaataccgggttggaaagttgtgtactct
ggcgacactcgaccatgctcggaaacgatagaagcatctgagggagctgccattcttata
cacgaggcaacttttgaggatggcatggcaggggaggccatagcaaagaatcacagtaca
acaaaggaagccattgatgtcggaaactcagcagatgcatatcggatcattcttacacac
ttcagtcaaaggtacccaaaaatccctgtattggatgagctgagcatgcataaaacctgc
atagcttttgacttgatgactataaacatagctgatttgcatgtgctccctgaagtgatt
ccgtacctgaaactgcttttcagaactgagatgttaattgatgattcagatgatcatatc
gtagaggcagatttataa
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