KEGG   Hibiscus syriacus (Rose-of-Sharon): 120128060
Entry
120128060         CDS       T09559                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hsyr04812]
    120128060
Cytoskeleton proteins [BR:hsyr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     120128060
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_SCAP Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_IFT140_1st WDR90_beta-prop_4th eIF2A Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR19_1st PROPPIN Beta-prop_RIG_1st Beta-prop_VPS8
Other DBs
NCBI-GeneID: 120128060
NCBI-ProteinID: XP_039001769
LinkDB
Position
Unknown
AA seq 854 aa
MSTKRAYKLQEFVAHSSSVNCLKIGKKSSRVLVTGGEDHKVNLWAIGKPNAILSLPGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWNLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNVIRFTPDGRWVVSGGEDNIVKVWDLTAGKLLHQ
FKDHEGQIQCLDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
TVLCGLHENMKVFSWEPVRCHDGVDVGWSKLSDLNVHEGKLLGCSYNQSCVGVWIVDISR
IEAYAVGNAKRVNGHSEPKSRSGGNLSVLNENTTKASMGRLPVSQNPDPLVKETKSLGRL
SISQNSDPAKESKTTRNLPGTPHRVNLNTARRTTQQSLVAVPSVAAPKRSSARANSAVNV
STFSKSDFVPVVVPRNDTRVEQAAELRKEVGISERSLEQVTESRREVGITGRSLESSQPV
AEARKEVGMVRRTSEQGADSRKELGIVGRTMPFSLQSKTSSFRNFQNSREDMDQPAISAL
PETAGSKAPEFSSVLDRSTFPSVKGPIHGTSAAEMNAREDGCIGSVKSEPNSVLELPSSY
RDENYDAQAQKSHRDAYPLESRKGVNYSGRTHSVVINWEKRRYNFDGPSLSISSRNVSVT
SMPLYKQRRYTSHVEKEMPSATDEYTVADVMEPHDQFIGSMQSRLAKLQVVRRLWERNDI
KGAINAMEKMADHAVLADVISIITEKMDIVTLEICTCLLPLLSGLLGSNMDRHLSICLDM
LLKLVWTFGSMICSTVSALTPTGVDIEAEQRFERCNLCFIELERVKQCLPVLTRRGGSVA
KSAQELNLALQEVS
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgagtaccaaacgcgcttataagctacaagaatttgtggcacattcttcaagtgtgaat
tgcctaaagattggaaaaaaatcatcgagggttcttgtgactggaggggaagatcacaag
gttaatctttgggctattggtaaaccaaatgccatactgagtttaccaggacacacaagt
ggaatagattcagtgagctttgattcttcagaagttctggtagctgcaggtgctgcaagt
ggtaccatcaagctttggaatttggaggaggcaaaaattgttcggaccctgactggtcat
agatccaactgcatttctgtggactttcacccctttggcgagttctttgcatctggctct
cttgatacaaatctaaagatatgggatatcagaaagaaagggtgtatccacacttacaaa
ggacatactcgaggagtcaatgtgatcaggtttacaccagacggtcggtgggtagtatct
ggtggtgaggacaacattgtgaaggtgtgggatttgactgctggaaaactgttgcatcag
ttcaaggatcatgaaggtcaaatccagtgcttagattttcacccccatgagtttctactg
gctacaggttcagctgatcgcactgttaagttttgggaccttgaaacctttgagcttatt
ggttcagctgggcctgagactacaggagtccgttgcttaaccttcaatcctgatggaaga
actgtactctgtggattgcatgaaaatatgaaggttttctcatgggaaccagtaagatgt
catgatggtgtggatgtgggatggtctaaattgtcagatcttaatgttcatgaaggaaag
cttcttggctgctcatataatcaaagctgtgttggagtatggattgtagacatctcgcgc
atagaagcatatgcagttggtaatgctaaacgtgtaaatggtcattctgaacctaaatct
cgttcaggtggaaacctctctgtattgaatgagaataccacaaaagctagtatgggaaga
ttacctgtttcacaaaatccagatcctttagtgaaggaaacaaaatctcttggaaggttg
tccatttcacaaaactcagatcctgctaaggagtccaaaaccacaagaaatctacctggt
actcctcatcgggtcaatttaaacactgctcgaaggacaactcaacaaagtttggtagca
gttcctagtgtagcagctccaaagcggagttctgcaagggctaattcagctgtcaatgtt
tctacttttagcaagtccgattttgtacctgtggttgtgcctagaaatgatacaagggtg
gagcaggctgctgaattaagaaaagaagttgggatatctgagagaagtttggagcaggtc
actgaatctagaagagaagttggaataactggtagaagtttggaatcgagtcagcctgtt
gctgaagcaagaaaagaagttggaatggttcggagaacttcggagcagggagctgattcc
agaaaagaacttggtattgttggaagaacaatgccattttctttgcagtcgaagacatcc
agttttcggaattttcaaaatagcagggaagatatggaccagccagctatctctgctctg
cctgagactgcaggttctaaggctcctgaattcagcagtgttctggacaggagtactttt
ccatctgttaaaggcccaattcatggaacatctgcggcagaaatgaatgcgagggaagat
gggtgcattggctccgtcaagagtgaacctaactcggtgttggaattgccttcaagctac
cgggatgaaaattatgatgcacaagcgcaaaaatcacacagagatgcatatcctctagaa
agccgaaaaggagtcaactattcaggaagaacacattcagtagtcataaattgggagaaa
aggagatataattttgatgggccttctttgagtatctcttcgaggaatgtatctgtgaca
agcatgcctttgtataaacaaagacgatacacttcccatgtggagaaagaaatgccttct
gctactgatgagtatactgttgcggatgtaatggagccgcatgatcaattcatcggttcc
atgcagtctcgtctagccaagttacaggttgttcgtcgactatgggaaaggaatgacata
aagggggcaatcaatgcaatggaaaagatggctgatcatgctgtgcttgctgatgtgatt
agcatcatcactgagaaaatggacattgtcacgttagaaatttgcacctgtcttctgccg
cttctatctggtctccttggaagtaacatggacaggcatttgagcatctgtcttgacatg
ctgcttaagctggtctggacatttggttcgatgatttgttcaacagtatcagctttgaca
cccactggtgtagacattgaggcagaacagaggtttgagcgttgcaacctctgctttata
gaactcgaaagagtaaagcaatgcctgcctgtccttaccagaagaggaggatcggttgca
aaatctgctcaggaactgaatctagcacttcaagaagtatcatga

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