Hibiscus syriacus (Rose-of-Sharon): 120128074
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Entry
120128074 CDS
T09559
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
hsyr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120128074
03083 Polycomb repressive complex
120128074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120128074
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120128074
Histone modification proteins
HAT complexes
HATB complex
120128074
HDAC complexes
Sin3A-HDAC complex
120128074
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120128074
PRC2.2
120128074
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
120128074
Heterochromatin formation proteins
Other heterochromatin formation proteins
120128074
Chromatin remodeling factors
NuRD complex
120128074
NuRF complex
120128074
NuRF complex (fruit fly)
120128074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD_LRWD1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
ANAPC4_WD40
MIOS_WD40
Beta-prop_RIG_1st
DUF6922
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
120128074
NCBI-ProteinID:
XP_039001789
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAEMTPEQVEEEFSVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSSPTPYGADPTLNVHKI
VLGTHTSGGATDFLMIADAILPTLASESNIASKNDDPIIPKVEITQKMRVDGEVNRARCM
PQNPVIIGAKTSGCEVFVFDYAKQAAKEQEGECVADLRLRGHDKEGYGLSWSPFKEGYLL
SGSQDHKICLWDLSAWPQDTVLDATHVYEAHKSVVEDVSWHLKNENLFGSAGDDCQLMIW
DLRTNQTEQHVKAHEREINYLSFNPYNEWVLATASSDSSICLFDMRKLTVPLHVLSSHSG
EVFQVEWDPNHETVLASSGDDRRLMIWDLNRIGEEQLEIELDADDGPPELLFAHGGHKAK
ISDFSWNKNEPWVISSVAEDNTLQVWQLAESIYRDDDDIQTAEE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatgacccctgagcaggtagaggaagagttcagcgtatggaagaagaacacc
ccattcctctacgatctcatcgtttctcacccgctcgagtggccttctttgactgtccac
tgggtaccttcttctcccaccccttatggagccgaccctactttaaacgttcacaagatt
gtcctcggcacccacaccagcggtggcgccacggatttcctcatgattgcagacgcaata
ctccccacccttgcctctgaatccaacatcgcctctaaaaatgatgacccaattatccct
aaggtggagataacacagaaaatgcgtgttgatggggaagtcaacagggctagatgtatg
ccgcaaaatccggttattatcggtgcaaagaccagtggctgtgaggtttttgtgtttgat
tacgccaagcaggcagcaaaggagcaagagggtgaatgtgttgctgatttgaggttgagg
ggtcatgataaagaagggtatggattatcgtggagtccgtttaaggagggttatcttctt
agtggttcacaagaccataagatatgcctgtgggacttgtcagcttggcctcaagatact
gttcttgatgctacgcatgtttatgaggcccataagagtgtggttgaagatgtatcatgg
catctgaagaatgagaatctatttggttcggccggtgatgattgtcagttgatgatctgg
gacttgcgcactaaccaaaccgaacaacatgttaaagctcatgagagagagatcaattat
ttgtcgttcaatccctataatgagtgggttctggccacagcatcttctgactcctccata
tgtttgtttgatatgcgaaagctgactgttcctttgcatgttttaagcagtcacagtgga
gaagtcttccaggtagaatgggatcctaatcatgagacggtgctggcatcttctggtgat
gatagaagattgatgatttgggaccttaacaggattggagaagagcaattagaaatcgag
ttagatgcagatgatggccctcctgagcttctttttgctcatgggggccataaagctaaa
atttcggatttctcatggaacaaaaatgagccatgggtgatttcgagtgtagccgaggat
aatactcttcaggtgtggcaattggcagagagtatatatcgagacgacgatgacattcaa
accgccgaggagtga
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integrated database retrieval system
