KEGG   Hibiscus syriacus (Rose-of-Sharon): 120129013
Entry
120129013         CDS       T09559                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3B
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120129013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsyr03021]
    120129013
   03036 Chromosome and associated proteins [BR:hsyr03036]
    120129013
Transcription machinery [BR:hsyr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     120129013
Chromosome and associated proteins [BR:hsyr03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    120129013
   PBAF complex
    120129013
   GBAF(ncBAF) complex
    120129013
SSDB
Motif
Pfam: SWIRM Myb_DNA-binding SWIRM-assoc_1 Myb_DNA-bind_6 Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 120129013
NCBI-ProteinID: XP_039002582
LinkDB
Position
Unknown
AA seq 462 aa
MAEKSPVKEVAFSESIPISNSNQLKQSPQFSAKLTTPTPPISDIPSTPTSRLPPVDADVI
HVPSYSRWFSWDKIDSCESRFLPEFFDGRSSKGPSLYKYYRNSIIKLFRENPSRKITFTE
ARRNLVGDVGSIRRVFDFLDHWGLINYSASSALSKPSKNTASNNKSSDSPSLESPSTAAP
TPKQSSTSRRFCGECKSLCTIACFVCDKYDSTLCARCYVRGNFRVGLSNADFRRVEISDE
AKADWSEKETLLLLEAIMHYGDDWKKVAQHVGGRTEKECVAHFVKLPFGEEYLGHPLSDD
AESGFDPNKSMRLTPLADASNPIMAQSAFLSALAGVEIAEAAAQAAVNILSKIDDTTASR
GGNGSLERNAKQESEISSNGDANQNALERAYADAKSQLDKEEQDIERAITEITEVQMKEI
QDKILRFEEMDLLMEKERQQLESMKHLLFIDQLNLSFRKNSN
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggcggaaaaatctccggtgaaagaagttgctttctcagagagcatccccatctcgaac
tcaaaccagttgaagcaatctccgcagttctccgccaaattgaccaccccaacgccaccc
atctccgatatcccctccactcccaccagccgtcttcctcccgtcgatgccgacgttatt
catgtccccagctactcccggtggttctcgtgggacaagatagactcttgcgagtcccgt
ttccttccggagttcttcgatggacgctcgtccaaaggccctagtctttacaagtattac
aggaactcaattataaagttattcagggaaaacccttcgcgtaagattaccttcactgag
gccaggaggaatctcgtcggcgatgttggctccattcgaagggtttttgatttcctcgac
cactggggtctcatcaattactctgcctcttcggctctctccaagccctccaaaaatacc
gcttctaataataaatcctcggattccccttctcttgaatccccttctacggctgccccc
acccccaagcagtcctctacttctcggcgattttgcggggaatgcaagtccctttgtacc
attgcttgcttcgtttgcgacaagtatgactccaccctgtgtgcaaggtgctatgttcgg
ggcaactttagggttggtctaagcaatgctgatttcaggcgggtagagatcagtgatgaa
gccaaggcagattggtcagaaaaagagaccttgctgcttcttgaagccattatgcattat
ggtgatgactggaagaaggttgcgcagcatgttggtggtagaaccgagaaggaatgcgtg
gctcatttcgttaaacttccttttggggaggaatatcttggtcatccattatctgatgat
gccgagtctggatttgatcctaataaaagtatgcgcctcacacctcttgccgatgcaagc
aacccaatcatggctcagtctgcctttttgtcagctttggctggtgtggagattgcagaa
gcagctgcccaagcagctgttaacattctatctaagattgatgacaccacagctagcaga
gggggcaatggatctcttgaaagaaacgcaaaacaagaatcagaaatttcatctaacggt
gacgccaaccaaaatgcattggaaagagcatatgcagatgcaaaatcacaactagacaag
gaagaacaagatattgaaagagcaattactgagattacagaagtgcagatgaaagagatc
caggacaagattcttcgctttgaggagatggatttgctgatggagaaagagagacaacaa
ttggagagcatgaagcatctactctttattgaccagctcaatctttcatttcgtaagaat
tcaaattag

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