Hibiscus syriacus (Rose-of-Sharon): 120129013
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Entry
120129013 CDS
T09559
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120129013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120129013
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120129013
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120129013
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120129013
PBAF complex
120129013
GBAF(ncBAF) complex
120129013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
120129013
NCBI-ProteinID:
XP_039002582
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MAEKSPVKEVAFSESIPISNSNQLKQSPQFSAKLTTPTPPISDIPSTPTSRLPPVDADVI
HVPSYSRWFSWDKIDSCESRFLPEFFDGRSSKGPSLYKYYRNSIIKLFRENPSRKITFTE
ARRNLVGDVGSIRRVFDFLDHWGLINYSASSALSKPSKNTASNNKSSDSPSLESPSTAAP
TPKQSSTSRRFCGECKSLCTIACFVCDKYDSTLCARCYVRGNFRVGLSNADFRRVEISDE
AKADWSEKETLLLLEAIMHYGDDWKKVAQHVGGRTEKECVAHFVKLPFGEEYLGHPLSDD
AESGFDPNKSMRLTPLADASNPIMAQSAFLSALAGVEIAEAAAQAAVNILSKIDDTTASR
GGNGSLERNAKQESEISSNGDANQNALERAYADAKSQLDKEEQDIERAITEITEVQMKEI
QDKILRFEEMDLLMEKERQQLESMKHLLFIDQLNLSFRKNSN
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaaatctccggtgaaagaagttgctttctcagagagcatccccatctcgaac
tcaaaccagttgaagcaatctccgcagttctccgccaaattgaccaccccaacgccaccc
atctccgatatcccctccactcccaccagccgtcttcctcccgtcgatgccgacgttatt
catgtccccagctactcccggtggttctcgtgggacaagatagactcttgcgagtcccgt
ttccttccggagttcttcgatggacgctcgtccaaaggccctagtctttacaagtattac
aggaactcaattataaagttattcagggaaaacccttcgcgtaagattaccttcactgag
gccaggaggaatctcgtcggcgatgttggctccattcgaagggtttttgatttcctcgac
cactggggtctcatcaattactctgcctcttcggctctctccaagccctccaaaaatacc
gcttctaataataaatcctcggattccccttctcttgaatccccttctacggctgccccc
acccccaagcagtcctctacttctcggcgattttgcggggaatgcaagtccctttgtacc
attgcttgcttcgtttgcgacaagtatgactccaccctgtgtgcaaggtgctatgttcgg
ggcaactttagggttggtctaagcaatgctgatttcaggcgggtagagatcagtgatgaa
gccaaggcagattggtcagaaaaagagaccttgctgcttcttgaagccattatgcattat
ggtgatgactggaagaaggttgcgcagcatgttggtggtagaaccgagaaggaatgcgtg
gctcatttcgttaaacttccttttggggaggaatatcttggtcatccattatctgatgat
gccgagtctggatttgatcctaataaaagtatgcgcctcacacctcttgccgatgcaagc
aacccaatcatggctcagtctgcctttttgtcagctttggctggtgtggagattgcagaa
gcagctgcccaagcagctgttaacattctatctaagattgatgacaccacagctagcaga
gggggcaatggatctcttgaaagaaacgcaaaacaagaatcagaaatttcatctaacggt
gacgccaaccaaaatgcattggaaagagcatatgcagatgcaaaatcacaactagacaag
gaagaacaagatattgaaagagcaattactgagattacagaagtgcagatgaaagagatc
caggacaagattcttcgctttgaggagatggatttgctgatggagaaagagagacaacaa
ttggagagcatgaagcatctactctttattgaccagctcaatctttcatttcgtaagaat
tcaaattag
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