Hibiscus syriacus (Rose-of-Sharon): 120129421
Help
Entry
120129421 CDS
T09559
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120129421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120129421
03110 Chaperones and folding catalysts [BR:
hsyr03110
]
120129421
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120129421
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120129421
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120129421
Messenger RNA biogenesis [BR:
hsyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120129421
Chaperones and folding catalysts [BR:
hsyr03110
]
Heat shock proteins
HSP60 / Chaperonin
120129421
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120129421
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120129421
Exosomal proteins of other body fluids (saliva and urine)
120129421
Exosomal proteins of breast cancer cells
120129421
Exosomal proteins of colorectal cancer cells
120129421
Exosomal proteins of bladder cancer cells
120129421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120129421
NCBI-ProteinID:
XP_039002856
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MASTLTAMSSVGSFIAPNGLVMDKKLPSSSNRLSSFASVSPSSFGSRRNVVLRKSRLPKI
SAAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAR
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
GIEKTSKALVSELKAISKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE
GKSAENNLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLIGILED
SIRSGCPILIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGT
VIRDEVGISLDKADKEVLGHASKVVLTKDTTTIVGDGSTQEAVNKKVVQIRNLIEAAEQD
YEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL
LRLASKVDAIKVSLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVRDVVSNDN
TRYGFNAATGNYEDLMTAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKDPEPVPMA
NPMDNSGYGY
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgactttaacagccatgtcttcagttggctcattcattgcacctaatggtctg
gtcatggacaagaagcttccatcttcttcaaacagattgtcatcttttgcttccgtttcc
ccgtcctcttttggtagtagacgaaatgttgttcttagaaagtctcgtctgcccaagatt
tctgcagcaaaagagttgcatttcaacaaggatgggtcagctataaagaaactgcaaact
ggcgtaaacaagcttgctgatttggtaggagtcacacttggaccaaaaggcaggaatgtt
gttctggagagtaaatatggctccccaaaaattgttaatgatggtgtgacagtagctagg
gaggttgagttggaggaccctgttgagaatattggggctaagttagtaagacaggcagct
gctaagacaaatgacttggctggtgatggaacgacaacatctgttgttcttgcgcaaggt
ctgattgctgaaggtgtcaaggtggtggcagctggtgcaaatcctgtcttgattactagg
ggaattgagaagacgtcaaaggctttagtatctgagcttaaggctatctcaaaagaggtt
gaagacagtgagcttgcagatgttgctgctgttagtgccgggaacaactatgaagtagga
aatatgatcgctgaggccatgagtaaagttggtcgaaagggtgtggtaaccctcgaggag
ggaaaaagtgctgaaaataacctatatgttgttgaagggatgcaatttgaccgtggttat
atatcgccttattttgtcactgatagtgagaaaatggcagtagaatatgagaactgcaag
ttgctactggttgataaaaagataacaaatgcaagagatcttataggcatcctggaagat
tctattagaagtggatgcccgattttgataattgctgaagacattgaacaggaagcctta
gctactttggttgtgaacaaacttagaggctctttgaagattgctgctctcaaagctcct
ggttttggagaacgcaagagccagtaccttgatgacattgctattctcaccggaggcact
gtaatcagagatgaggttggtatttccttggacaaagcagacaaagaagtcttgggtcat
gcttctaaagtggtgcttaccaaggatacaaccaccatagtgggtgatggaagcacccag
gaagcagtgaacaaaaaagttgtgcaaattagaaatctcattgaggctgcagaacaggac
tatgagaaggaaaaacttaatgaaaggattgctaaattatctggtggtgttgcagttata
caggtcggagctcaaactgaaacagaacttaaagaaaagaagttgagagtagaagatgct
ctaaatgcaactaaggctgcagttgaggaaggtattgttgttggtggtggttgtactttg
ctaagacttgcctctaaggtggatgctattaaggtttcacttgctaatgatgaagaaaag
gttggagcagatattgttaaaagagcattgagttaccctctaaaattgatagctaagaat
gctggtgttaatggaagtgttgtgagcgagaaggtacgagatgtggtctccaatgacaac
actaggtatgggttcaatgctgccaccggaaattatgaggatcttatgactgcaggaatt
atcgatccaaccaaggtggtcaggtgttgcttagagcatgcagcttcagtggccaagaca
ttcttgatgtccgactgtgtggtggtcgaaataaaggatcccgagcctgtgcctatggcc
aaccccatggacaattcaggatacggctattaa
DBGET
integrated database retrieval system
