Hibiscus syriacus (Rose-of-Sharon): 120129694
Help
Entry
120129694 CDS
T09559
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
hsyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120129694
09124 Replication and repair
03420 Nucleotide excision repair
120129694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120129694
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120129694
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120129694
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120129694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
SHOCT
Motif
Other DBs
NCBI-GeneID:
120129694
NCBI-ProteinID:
XP_039003070
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MASGHVTKRAKYKTTIKDPGTPGTLRMTLEKILFVPHNPKSAVKLDVEFQYIKGQKHTKE
GSNKPPWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLAKGGEVSEKPSVAYPDEQLSA
AEMELRIKLLQEDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREASKKTKQRLGFKSAM
ISDIKPSADGRTNKVTFNLTPEIILQIFAEKPAVHRAFLSYVPNKMSERNFWTKYFRAEY
LHSTKNSIAAAAEAAEDEELAVFLKQDDILASEARRKIRRVDPTLDMEADEGDDYTHLPD
HGLFRDGNKEMAESQNELYKRTLSQDINRHAAVVLEGRTVDVELEDTKAVAEALAQSKRE
SSKKGESDGDTSRERLDRLSRMTEIEDLQGSNNLPLAPLCIKDPRDYFDSQQANALRTSG
DALGGTEQIKCSLSIPEVYCSLRASISLIKAMGLNEPIVKPEVAHQVFDALTYSISNTKH
NIGKNPQESVLDRLPRKTKEDLLHHWTSIIELLKHFWSSYPITTSYLYAKVNRLKDAMSN
IYPQLEEIKGSVPSELRHQVSLLVRPMHQALDAAIQHYEASMQKRSTQSGEKPNGYV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggtcatgtgactaagcgagctaagtataagaccactatcaaggatcctgga
actcccggtactcttagaatgacgttagagaaaattttatttgtacctcataaccctaaa
tcagccgtgaagcttgatgtcgaatttcaatacatcaaaggtcaaaagcatacaaaggag
gggtcgaacaagccaccgtggcttaaccttactaacaatcagaatgggagtttcatcttt
gagtttgaaaattattcagatctccaagattgtcgagattttgtggggaaagttcttgca
aagggtggagaagtttctgaaaagccttctgttgcatatcctgatgaacaactcagtgcc
gctgaaatggagctacgtattaagttattacaggaagatagtgaactgcagaaacttcac
aagcaatttgtgcttagtggtgtcctcacagaagctgagttttgggcaacacggaagaag
ttactggatagagaggccagtaaaaagacaaaacagaggctgggttttaaaagtgcgatg
atttctgacatcaagccatcagctgatggtcggacaaacaaagtcacatttaatttaacc
ccagagatcattcttcaaatttttgccgagaagccagctgttcatcgtgcattcttaagt
tatgttcctaacaagatgtcagaaaggaatttctggaccaaatattttagagcagaatac
ctacatagtacgaaaaacagtattgctgctgcagccgaggctgctgaagatgaggagctt
gctgtttttctaaagcaggatgacatattggcaagtgaagcgcggaggaagatccgtcgg
gttgacccaactctggacatggaggctgacgagggtgatgattatacacatcttcctgat
catggactctttcgcgatggtaataaggaaatggcagaatcacaaaatgagctatacaaa
agaactctatcccaggatattaaccggcatgctgcagttgttctcgagggaagaactgta
gatgtggagttggaagacacaaaggctgtagcagaagcacttgctcagtcaaaacgggaa
tcatcgaagaagggagaatctgatggggatacaagtcgtgagaggttggataggttatca
aggatgactgaaatagaagatcttcagggatcaaataatcttccattagcacctctttgc
attaaggatcctcgggattattttgactctcaacaagccaatgcacttagaacttctgga
gatgcacttggtggaactgaacagataaaatgcagtttgagcatcccggaggtgtattgt
tctttaagggcttctatctcgttgatcaaagctatgggtttgaatgagcctattgtcaaa
cccgaagttgctcatcaagtttttgatgctttgacttatagtatctccaatactaaacat
aatattgggaaaaatcctcaagagagtgttctggacaggctaccaaggaaaactaaggag
gacctattgcatcattggacttcaatcattgaactactaaaacatttttggtcatcatat
cctatcaccacctcttacctctatgcaaaggttaacagactgaaggatgccatgtcaaat
atctatccacaattagaggagattaagggttctgtcccgtcggagcttcggcatcaggtt
tccctccttgttcgtccaatgcatcaggccctagatgccgccattcaacattatgaagct
agcatgcagaagagatccacacagagtggagagaaaccgaatggatacgtctag
DBGET
integrated database retrieval system
