Hibiscus syriacus (Rose-of-Sharon): 120130064
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Entry
120130064 CDS
T09559
Name
(RefSeq) protein GIGANTEA-like isoform X1
KO
K12124
GIGANTEA
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120130064
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NCBI-GeneID:
120130064
NCBI-ProteinID:
XP_039003343
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Position
Unknown
AA seq
1168 aa
AA seq
DB search
MANPSKRWIDGLRFSSLFWSPPQDPQERKIQITAYVEYFGQFTSEQFPEDIAELIRSRYP
SKEQRLFDDVLATFVLHHPEHGHAVVLPIISGIIDGTLVYDKSTSPFASFISLVCPSSEN
EYSEQWALACGEILRILTHYNRPIYKMEPQNSELDRSHSSSQATTSEPIDGEPSFHIPLM
QQERKPLRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGDLKPPTTASSRGSGKHP
QLMPSTPRWAVANGAGVILSVCDEEVARYETASLTAAAVPALLLPPPTTALDEHLVAGLP
ALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYATGI
KLPRNWMHLHFLRAIGTAMSMRAGIAADTAAALLFRILSQPALLFPPIRQVEGVEVQHEP
SGCYISCYRKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSA
VDLPEIIVSTPLQPPVLSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVEAILQRTFPP
EPSREQTRKTRYSIGSASKNLAVAELRTMVHSLFLESCASIELASRLLFVVLTVCVSHEA
QFKGSKRPRGEESFPPDEGIEESQAQSEKLKNIKSRKAKKQGPVAAFDSYVLAAVCALAC
ELQLFPLVTRGNNQSTSIDVQATVNPVNVNGSSIEYGHGIDSAIHHTHRILAILEALFSL
KPSSVGTSWGYSSNEIVAAAMVAAHVSELFRRSKACMYALSVLMRCKWDNEIYSRASSLY
NLIDIHSKAVASIVNKAEPLEAQLIYAPVRKSSPCLDDRKQNKCSRATCFDPGQSSTSEF
EDSTHSNNNLRCERLLASNEGSGNSLGKGITSFPIDASDLANFLTRDRHIGFNCSAQILL
RSVLVEKQELCFSVVSLLWHKMIAAPETQLSAESTSAQQGWRQVVDALCNVVSASPTKAT
TAVVLQADRELQPWIAKDDDQGQKMWRINQRIVKLIVELMRNHDSPESLVIVASASDLLL
RATDGMLVDGEACTLPQLELLEATARAVQPVLEWGESGLAVADGLSNLLKCRLPATTRCL
SHTSAHVRALSTSVLRNILHIGSIDSKSKVELNGLHGTSYQYFNIGAIDWQTDIEKCLTW
EAYGQLARGMPIQSLDTAAKELGCNISI
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggctaatccatctaagaggtggattgatggtcttcggttttcatcactgttctggtca
ccaccacaagaccctcaagaacgaaagattcaaattactgcttatgttgagtatttcggg
caatttacatcagaacagttccctgaggatattgctgagcttattcgcagccgctatcca
tcgaaggagcaacgcctttttgatgacgttcttgcaacttttgtccttcatcatccagaa
catgggcatgcggttgttcttccaataatttcaggcatcattgatggtacgctggtgtat
gataaaagtacctctccttttgcgtcattcatctccttagtctgcccaagtagtgagaat
gagtattctgaacagtgggctctagcatgtggagagatcttgcgaattctgactcattac
aaccgcccgatatataaaatggaaccacaaaatagtgaactagataggagccatagcagc
agccaagccacgacaagtgaacccatagatggggaaccttcctttcatatacctttgatg
caacaggagaggaagcctttaagacctttgtctccttggattactgatatattgcttgca
gcacctttgggtatcagaagtgattacttccgttggtgcagtggtgttatgggaaaatat
gcagctggggacctcaagccacctactactgcttcttctcgtggatctggaaagcatccg
cagctcatgccatcaactccaagatgggctgttgcaaatggtgctggtgtcattttaagt
gtatgtgatgaagaggttgcacgctatgagactgctagtttaacggctgctgcggtccct
gctcttctacttcctcccccaacaacagctttggatgagcatctagttgctgggctacca
gctcttgaaccatatgcacgtttgtttcatcggtattatgctattgcaactccaagtgcc
acccaaagacttcttcttggacttttagaagcaccaccatcgtgggctccagatgcactt
gatgctgccgtgcagcttgtggaactccttcgggctgctgaagattatgcaactggtata
aagcttcctcgaaattggatgcatttgcattttttgcgggcaattgggactgcaatgtct
atgagagcgggtattgctgctgatactgccgcagctttactttttcgcatactttcacag
cctgcattgctttttcctccaataagacaagttgagggagtagaagttcaacatgaacct
tctggttgttatatatcgtgctatagaaagcagattgaggttcctgcggctgaagcaact
attgaagctactgcccaagggatcgcgtcaatgctttgtgctcatggaccggaggtggaa
tggagaatatgtaccatatgggaagctgcttatggcctgattcccttgagctcttcggct
gttgatcttccagaaattattgtttcaaccccgttgcaacctcctgtattatcgtggaac
ctatacataccacttctgaaggtcctggaataccttccacgtggaagtccttctgaagca
tgtctcatgaagatatttgtggcgactgttgaagcaattctacagagaacttttccacct
gaaccctccagggagcaaaccagaaaaacaagatacagcatagggtctgcctcaaagaat
cttgctgtggcggagcttcgtacaatggtgcattccctctttttggaatcatgtgcttct
atagagcttgcttcacgcctactttttgttgtcttgactgtgtgcgttagccatgaagct
cagttcaaggggagtaagagaccaagaggtgaagaaagttttcctcctgatgagggcatt
gaggaatcacaggcacaatctgaaaagctgaagaacataaaatccagaaaagcaaaaaaa
caaggccctgtagctgcgtttgattcttatgtgctggctgctgtttgtgctcttgcctgc
gagcttcagttgttccctttggttacaagaggaaataatcaatcaacttctatagatgtt
caagctacggtcaaccctgtaaatgtaaatggatcttctatcgagtatggacatggtatt
gactcagctatccatcatactcacagaatcttggcaattttagaggcacttttttcgcta
aagccatcttctgttggcacctcgtggggttatagttcaaatgaaatagttgctgcagct
atggttgctgctcatgtttctgaactatttagacggtcaaaggcttgcatgtatgcactc
tctgtcctaatgcgatgcaagtgggataatgaaatctactccagggcatcatcattatat
aatctcattgatattcacagcaaggctgtcgcatccattgttaacaaggctgaaccatta
gaagcacaactgatatatgcacctgttaggaaatcttccccttgtttagatgacagaaaa
caaaacaagtgttcgcgtgccacttgctttgatcctggacagtcatctacttcagaattt
gaagattcaactcattcaaacaataatctcagatgtgagaggctgttagcatcaaatgaa
ggctcaggaaattccttgggcaaaggtatcacaagtttcccgatagatgcctcagatttg
gccaattttctcacaagggacaggcacataggattcaattgcagtgcacaaattcttctg
agatcagtgcttgtggagaaacaagagttatgtttctctgttgtttcactactgtggcac
aagatgatagcagcccctgaaacacagctcagtgctgaaagcacatctgcccagcaagga
tggagacaggtggttgatgcattgtgcaatgttgtatcagcttcaccgacaaaagcaact
acagcagttgtacttcaggcggatagggaattacaaccttggattgccaaagatgatgat
caaggtcagaagatgtggagaatcaaccagcggattgtaaagttgatcgtggaactgatg
agaaaccatgatagcccagaatcattggtaattgtagcaagtgcttctgatctacttctt
cgtgctacagatgggatgcttgttgatggggaagcttgtactttaccgcaactggagctg
ctggaagcaacagctagagcagtccagccagtactcgagtggggagaatctggactggca
gtggcagatggactttcaaacctgttaaagtgtcgtctaccagctacaactcgatgcctt
tctcatacaagtgcacatgttcgagctctcagcacatcagtccttcgcaatattttgcac
ataggttcgatcgattctaagtctaaggtggaactaaatggcttgcatggcacttcttat
caatacttcaatataggtgccattgactggcaaactgatatcgaaaagtgcttaacttgg
gaagcttatggtcagcttgcaagaggaatgcctatacaatctctcgacaccgccgccaaa
gaattaggctgtaatatatctatataa
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