Hibiscus syriacus (Rose-of-Sharon): 120130115
Help
Entry
120130115 CDS
T09559
Name
(RefSeq) mechanosensitive ion channel protein 3, chloroplastic-like
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120130115
Transporters [BR:
hsyr02000
]
Other transporters
Pores ion channels [TC:
1
]
120130115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MSL2_3
Msl2-3_C
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-GeneID:
120130115
NCBI-ProteinID:
XP_039003375
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MTRVDTMQLSNELRVHDSHGCGQNLGVIGKGRLHLIRINLSSHDMRQDAWRLHLLSSVCR
PIRHVYPRSDVIICRSVPIPNGGNEIPIIKSAGVALTRAFGDLHASPVVPRLIPAVAIIA
FAAWGLGPLMRLGRVMLFHRSDNSWNKSRTHHIMTYYLRPVLLCTGVSLLCRALDPVVLA
SEARQAVKQRLLHFVRSLSTVLPISYCLSSLILRNVFTEMNDSNDARNMGFDFAGKAVYT
AVWVAAVSLFIELLGFSTQKWVTAGGLGTVLITLAGREIFTNFLSSVMIDATRPFVVNEW
IQTNIDGYEVSGTVEHVGWWSPTIIRADDREAVHIPNHKFTMNVVRNISQKTHWRIKNYF
AISHLDVNKINNVVADMRKVLAKNPQVEQQKLHRRVFLESINPENQALMIMVSCFVKTSR
IEEYFCVKEAILLDLLRVISHHHARLATPIRTVQKMYGEAEIEDVPFADTIFRRSRTTTN
RPLLLIEPSYKVNGDDKVKASTRVNEEKKSMEEATLTSDLKGNTNSGSTLDSKEDRVMAS
STNNPSSGSKASLSEAESGNSIEVNSEKQFSEGKSETRKPASSGSVVITDPRSANEESEI
PVSVSQAQQDVDKSTPQPLVARSPSLEENIVLGVALEGSKLTLPIEEEMSTLLEELGNHQ
SGSRSHSVSQEKKDDEVPVVHGKIISR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtgttgatactatgcaattgtctaatgaactgagagttcatgatagtcatggt
tgcggtcaaaaccttggtgtcataggaaaaggccggctacatttaattcgtatcaatctt
tcctcgcatgatatgcgacaggatgcttggagacttcatcttttgagcagtgtttgtaga
cccataagacatgtatatcccaggtctgatgtcattatctgccgatctgttccaattcct
aatgggggaaatgagattcctataataaaatctgctggtgtggctttgaccagggcattt
ggtgatttacacgccagtccagttgtacctcggttgatcccggcagttgcaattattgct
tttgctgcatggggccttgggccacttatgcggttaggcagggttatgcttttccatagg
agcgataacagttggaataagagtagaacacatcatattatgacctattatcttcgacct
gtgttgctctgtactggagtgtcactcctctgcagagcattagatccagtagttttagcc
tcagaagcaaggcaggctgttaagcaacgacttctacattttgtgcgatcattatcgact
gttcttcctatttcttattgtttgtcaagcctaattttaagaaatgtatttacggagatg
aatgattccaatgatgcaagaaatatgggctttgactttgctggaaaagctgtttatact
gcagtatgggttgctgctgtatcattgttcattgaattgctaggtttttccacccagaag
tgggtaactgctggtggacttggtacagtattgatcacccttgctggtcgtgagatattt
acaaattttctttcaagtgtaatgatcgatgcaacaaggccttttgttgtcaatgaatgg
attcaaactaatatagacggttatgaagtttcagggacagtcgagcatgttggatggtgg
tcaccaacaattataagagctgatgaccgtgaggcagttcacatcccaaaccacaagttc
actatgaatgttgtgaggaacattagccagaagactcattggcgcatcaagaattacttt
gccattagtcatttggatgttaataaaatcaataatgtagtagctgacatgcggaaggtt
ttagccaaaaatcctcaagtagagcagcaaaaattgcatagaagagtatttttggaaagt
attaatccagaaaaccaggctcttatgataatggtatcctgttttgtgaaaacatcacgt
atagaagaatatttctgtgttaaggaagctatactgttggatcttctcagagttattagc
catcatcatgctcggcttgccacccctatccgtacagttcagaagatgtatggcgaggct
gaaatagaagatgtacctttcgctgataccattttcagacgttctcgaacaactaccaac
cgtccacttctcctcattgaacccagttataaagttaatggtgatgacaaagtcaaagct
tcaacacgtgtaaatgaagaaaaaaaatccatggaggaagcaaccctcacatctgacttg
aagggaaatactaattcgggatcaacattggactccaaagaagacagggttatggcatca
tcaaccaataaccccagttcaggttcaaaagcctcattgtccgaggctgaaagtgggaac
tcgatcgaagtgaactccgaaaagcaatttagtgagggtaagagcgaaactcggaagcca
gcaagttcaggaagtgtggtgatcactgatccacggtctgcaaatgaagaatctgaaatc
ccagtgagcgtttcacaggcacagcaggatgtcgataagtcgactccgcagccattggtg
gctaggtcaccttccttggaagagaacatcgttcttggtgttgcactggagggctcaaaa
ctgacacttccaatcgaagaagaaatgtcgacactattggaggaattgggcaatcaccag
agtggaagtaggtctcattcggtcagccaggagaagaaagatgatgaggtgccagtagtt
catggtaaaattattagtcgataa
DBGET
integrated database retrieval system
