Hibiscus syriacus (Rose-of-Sharon): 120130244
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Entry
120130244 CDS
T09559
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120130244
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120130244
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120130244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3H2C3
zf-RING_4
AF_0924
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
120130244
NCBI-ProteinID:
XP_039003449
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MEMNRVMVLLLLLLWFLCFSSVFLMTTASVILIVNNVTFSFDDIEASFAPAIRGSGECGV
LYLANPLDGCSDLSNKVDKGSNVSSPFALVIRGGCSFEDKVRRVQKAGFKAAIVYDNDDD
DDDVLVAMAGNAAGIKIHAVFVSKASGEILKKYAGLTYMELWLIPSFENSAWSIMAISFV
SLLAMSAVLATCFFVRRHRIRRERPQSSRVREFHGMSRRLVKAMPSLIFTAVLEDNCTSR
TCAICLEDYTVGEKLRILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGDPPASEST
PLLSSTPSSVASSALSYTRSSLASSLSAIRIAPAASPSPSISHSHSRAGTPYIQQSLRSY
HQSPSMSFSRSSVDLRNASSQRSRASHLVSPASLNYPSISPLNTRYMSPYFPSPSNESPG
LVSSSGHLMHHPLHCSESAASFSPFASAHTLPEC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaatcgagttatggtgttattattattattattatggtttctctgtttttcg
agtgttttcttgatgacaacagccagtgtgatcttgattgttaacaacgttaccttctct
tttgatgacattgaagctagttttgccccagcaattagagggtcaggggaatgtggggta
ttatatttggcaaaccctcttgatggctgttcggatttgagtaataaagttgataaaggt
tccaacgtttcttccccattcgcattggttattagaggaggctgcagttttgaagataaa
gtaaggagagtacagaaggcgggattcaaagccgctattgtctatgacaatgatgatgat
gatgatgatgtcctggttgcaatggcagggaatgcagctggaataaaaatacatgccgtc
tttgtttccaaagcttctggtgaaatactcaaaaagtatgctgggcttacttatatggag
ctgtggctaatacctagctttgaaaactcagcatggtcaatcatggccatctcctttgtt
tcgctacttgcaatgtcagcagtgctggcaacttgtttctttgtacgcagacatcgcatt
aggcgagaacgccctcagtcttctcgagttcgtgaattccatggaatgagccggcgtttg
gtaaaagcaatgcctagtttgatattcactgcagtcttggaagataattgtacatcaaga
acctgtgcgatatgtcttgaagattatactgtgggcgagaagctcaggattcttccatgt
cgccacaagttccatgctttttgtgttgattcctggcttacaacatggagaactttttgc
cctgtatgcaagcgagacgcgagaacaagcacaggtgatcctccagcatcggaaagtaca
ccattgctttcatccaccccaagctctgtggcgtcctctgcattgtcatatactcgatct
tcattagcgtcatcattatcagccatacgaatagccccagcagcatctccgtccccgtct
atttctcatagtcattctcgggccggcaccccatatattcagcaatcgcttaggtcctat
catcaatctccttccatgagcttcagcagaagctcagtagatctcaggaatgcatcttcc
caaagatctcgtgcttctcatctggtttcaccggcctcgttgaattacccatctatatcg
cctcttaatacaagatacatgtcaccgtattttccaagcccaagcaatgagtcaccaggt
ttagtcagttcttcgggtcacctgatgcatcatccactacattgtagcgagtcagctgct
agtttttctccatttgcatctgcccatactcttccagaatgttaa
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