Hibiscus syriacus (Rose-of-Sharon): 120130921
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Entry
120130921 CDS
T09559
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120130921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120130921
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120130921
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
120130921
NCBI-ProteinID:
XP_039004000
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MQRKMACSFPDEVLEHVFSFIQSDKDRNAVSMVCKSWYEIERWCRRKIFIGNCYAVSPRM
VIRRFPEVRSIELKGKPHFADFNLVPDGWGGYVLPWIAEMAGAYPWLEEIRLKRMVVTDE
CLELIAKSFKNFKVLVLFSCEGCSTDGLAAIAASCKNLRELDLRESDVDDLGGHWLSHFP
ETYSSLVSLNISCLGSDEVSLSALERLVDRCTNLRSLRLNRAVPLDKIASILGRAPQLVD
FGTGTYGAELQLDVFSNLAGAFSSCKELRSLSGFWDVAPAYLPAIYPVCSRLTSLNLSYA
TIQSPDLIKLLSHCPSLQRLLVLDYIEDSGLEAVSSSCKDLQELRVFPSDPFGVEPNVSL
TEQGLVSVCLACPKLQSVLYFCRRMSNEALIMIAQNRPNLTRFRLCIIDPRTTDYLTLEP
LDVGFGAIVEHCKDLRRLSLSGFLTDRVFEYIGRYAKKLEMLSVAFAGESDLGLHHVLSG
CESLRKLEIRDCPFGDKALLTNAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVID
ESGPPGSRLDSCSVDKLYIYRSVAGLRFDIPPFVWTMD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaaaatggcgtgttcgttcccagacgaggtgctggagcacgtcttctcgttt
atacaatcggataaagaccggaacgcggtgtcgatggtgtgtaagtcgtggtacgagatc
gagaggtggtgccggaggaagatatttatcgggaactgttacgctgtgagccctaggatg
gtgatcagacggttccctgaagttagatcaattgagctgaaagggaaaccgcactttgcg
gacttcaacctggttccggacggctggggcggttacgtccttccgtggatagcggagatg
gctggtgcctacccttggctcgaagagattcggcttaaacgcatggtcgttacggacgaa
tgcttggagcttatcgctaagtcgtttaagaacttcaaagtgttggttcttttctcttgt
gaagggtgttcaactgatggactcgctgctattgcagctagctgcaagaatctgagagag
ctggacttgcgagaaagtgatgtggatgatcttggagggcattggctcagtcattttcct
gagacatactcatccttggtgtctcttaacatttcttgcttaggttcggatgaagttagt
ttatcagccttggagcgcctggtggatcgatgtactaacctcaggagtcttcgccttaac
cgtgcagtgccgcttgataaaattgccagcatattgggtcgtgctccgcagctggttgat
ttcggcactggtacatatggtgccgaactacagttggatgtcttctctaacttggcgggt
gcgttttctagttgcaaggaattaaggagcctgtctgggttttgggatgtggccccagct
taccttccggctatttaccccgtctgctcccgattaacgtcactgaacttgagctatgct
accatacagagtcctgatcttatcaagcttttaagtcattgtccaagtttgcagcgcttg
ttggtattggattacattgaagatagcgggcttgaagctgtctcgtctagttgcaaggac
ctacaggagttacgggtgtttccatctgacccgtttggtgtagagccgaatgtatccttg
acagaacagggccttgtttctgtttgtttggcttgtcctaagctacagtcagttttgtac
ttctgccgtcgaatgtctaacgaggcattaataatgattgctcagaaccgtccaaatttg
acccgttttcgcctttgtataattgacccaagaacaactgattatctgacccttgagcca
cttgatgttggttttggagccatcgtcgagcactgcaaggatctcaggcgtctttccctc
tccggtttcctcacagatcgtgtgtttgaatacattgggaggtatgccaaaaagctagag
atgctgtctgtggcttttgcaggagagagtgatttgggacttcatcatgtgctttctggg
tgtgaaagtctccggaaactagagattagggactgcccctttggggacaaggctctattg
accaatgctgcaaagctggagacaatgcgatccctttggatgtcttcttgctccgtgagt
ttcggagcatgcaaactgctaggtcagaagatgcccaggttgaatgttgaagttatagat
gagagtggacccccaggttcaaggctggatagctgctcagtcgataagctctacatctat
aggtctgtcgccggactgaggtttgacatacctcctttcgtttggacaatggattag
DBGET
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