Hibiscus syriacus (Rose-of-Sharon): 120131201
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Entry
120131201 CDS
T09559
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120131201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsyr03000
]
120131201
Transcription factors [BR:
hsyr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120131201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
FCSD_central
Motif
Other DBs
NCBI-GeneID:
120131201
NCBI-ProteinID:
XP_039004176
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MDMHSSGEELVIKTRKPYTITKQRERWTEEEHDRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEALAKGVPISQALDIEIPPPRPKRKPSNPYPRKTGVAHTVQEGAKD
GKSKMLISSLCCKQVLDLENEPLLERPNGDEKATNLKENQDESCSKVFTRPLEANCSSAS
SMNKNFIPRSVALINSCTFREFVPSLKEVINHDKHEYCVTLELESYKAYKLIVQQTIHDN
GTSKASNLESSCTSYQKPAQGQRKDGSDGVLCADEMQATQNYTRHVAVHVLDGGLKTCAQ
NTSLDMSFQDSVFHANGDVHGPNLFTNPAASATTEHQNTAPRSTHQALSPFHTPFFHLHR
NQEDCQSFLHVSTFSSLIVSTLLQNPAAHAAASFASTFWPYANVDSSGDSPTSGLGGFPP
RQLNSAPGMAAIAAATVAAATAWWAAHGLLPVCASLHPGFTCAPAFTAAVPPMENGQAPT
AKMEHNDKTDQPLSMQDKQLDPEYSEALQDQQSPSKSPTSSSHCEERGDAKVNTGVKATD
DEKAAEVIEPQDANKTKNIKQVDRSSCGSNTTSSSEVETDVLEKHEKDKEDPNDGDANHP
QVECNRRSRSSINPSDSWNGVSEEGRQAFQALFSREVLPQSFSPPHKGKNKGQHKENVGE
HKQNPVEKDGETSALDPNSSCSDHPEVMKNASSRNEKNTAEEGLLTIGLGHSKPKASRTG
FKPYKRCSVEAEENRVMNTGSQSKEKGPKRVCLEREAST
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggacatgcactcctctggagaagaactcgttattaagactaggaagccttatactatt
actaaacaacgcgaaagatggactgaggaggagcatgataggttcctagaggccttgaag
ctctatggacgagcttggcaacgcattgaagaacacataggaacaaagactgcagtgcag
atcaggagtcatgctcaaaagttcttttcaaagctggagaaggaggcacttgctaaaggt
gtaccaataagtcaagctcttgacatagaaattccacctccacgccctaaaagaaagcca
agcaatccttatcctcgaaaaaccggtgttgctcacacagttcaagagggcgcaaaggat
ggaaaatccaaaatgctgatatcttctttgtgttgcaagcaagtgttggacttggagaat
gaaccacttctcgagagacctaatggagatgaaaaggcaaccaatctgaaagaaaaccaa
gatgagagttgctccaaggtcttcactcgtccccttgaagcaaactgctcctctgcgtct
tccatgaataagaattttataccaagatcagtagcactcataaactcttgcacatttagg
gagtttgtaccttctctaaaagaggtaataaatcatgacaaacatgaatactgcgtcact
cttgagcttgaaagttataaagcttataaacttattgtccagcagacaattcatgataat
ggaacaagtaaggcttcaaacttggagagttcttgcacttcatatcagaaaccagctcaa
ggccagagaaaagatggttcggatggtgttttatgcgcagatgagatgcaagccactcaa
aattatactcgacatgttgcagtgcatgtcctagatggaggcctgaaaacatgtgctcaa
aatacttccctggatatgtcatttcaggattctgtatttcacgctaatggcgatgttcat
ggacctaacttgtttacaaatccagcagcatctgcaactaccgaacatcagaatactgcc
ccaagatctactcatcaggcattgtcaccttttcatactcccttttttcatcttcaccgc
aatcaagaggactgtcagtcatttctacatgtctccactttttccagtctcattgtatct
actttgttacagaatccagctgctcatgctgcagcaagctttgcatctacattttggcca
tatgcaaatgttgatagttctggcgattctcccacaagcggcctaggtggtttcccacct
agacaactgaactctgctcctggtatggctgcaattgcggctgcaactgtagcagctgcc
actgcatggtgggccgcccatggactgcttcctgtatgtgcttctcttcacccgggcttt
acctgtgctcctgcattcactgctgcagttccaccaatggagaatggtcaagctccaact
gcaaagatggaacacaatgataaaactgatcaacctctctccatgcaggacaagcaacta
gaccctgaatactctgaagctttgcaagatcagcagtcaccatctaaatcacctacttct
tcatcgcattgtgaagagagaggagatgcaaaagtgaatactggagtgaaagctaccgat
gatgagaaggctgccgaagtaattgaacctcaggatgcaaataaaacgaagaacataaaa
caagttgaccgctcctcatgtggctccaatacaacttcaagcagtgaggtagagacagat
gtgttagaaaaacatgaaaaagacaaggaagatccaaacgatggcgacgcaaatcatcca
caagtcgaatgtaaccgtcgaagtagaagcagtatcaacccgagtgattcttggaatggg
gtatctgaagaggggcgacaggcttttcaagccctcttctccagagaggtattgccacaa
agcttttctcctccacacaagggcaagaacaagggacagcataaggaaaacgtaggtgaa
cacaagcaaaatccagtcgagaaagatggagaaacatcagctttagaccccaacagctcg
tgttctgatcatccagaagtcatgaaaaacgcatcatctagaaatgagaagaacactgca
gaagagggcctgctgacgattggactaggacattcgaaacctaaggccagccgaaccgga
tttaaaccttacaaaaggtgttctgtggaagccgaggaaaacagagtgatgaacaccggc
agtcaaagcaaagagaaaggcccgaagagggtatgcttggaacgggaagcttcaacttga
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