Hibiscus syriacus (Rose-of-Sharon): 120131352
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Entry
120131352 CDS
T09559
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03015
mRNA surveillance pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120131352
09122 Translation
03015 mRNA surveillance pathway
120131352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120131352
Spliceosome [BR:
hsyr03041
]
Complex A
Other components
Complex A specific factors
120131352
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
120131352
NCBI-ProteinID:
XP_039004289
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MYGQGGEAAPPSYAGGHGGYGGDPGYGGRGGVRGGGDGYGRSSQNRGGGGGYQGGDRGGR
GGGGRGGGRGRGGGGRDGDWLCPNPSCGNLNFARRVECNKCGASSPVGSGDRGSSGYNRG
GGGGYGANRGGRDGIRGGYDSGRSNNHGDRGGNYDNRSGSYGGNQRGEDGGYGHVPPSAP
SSYSGGAGGSYPPPPNAYDGNTNYGMGSVPPPTSYTGGPTSYPSSYGGPAGGYGGKGLSD
ARTGGRVGNPGGYDSGYGSGGPPHQAGGYGGPSTDAPGKIKQCDDNCGDSCDNRRIYISN
LPPDCTIEELKDLFGGIGQVGRIKQKRGYKDQWPWNIKIYTDEKGNPKGDAVLSYEDPQA
AHSAGGFFNNHVMRGYTISVAMAEKTAPKVHDHGGGRGGYGGGGDRRRDGGSGPDRHHYG
GNRSRPY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtcaaggaggcgaagctgctccgccttcatatgctggtggacatggcggttat
ggaggggaccctggttacggtggccgtggcggcgtaagagggggaggtgatggatacggt
cgcagttctcaaaaccgcggaggcggtggaggctatcaaggaggagaccgtggtggaagg
ggtggcggtggaagagggggtggccgtggaagaggaggaggaggcagagatggtgattgg
ctttgcccgaaccccagctgtgggaacttgaactttgcaagaagagttgagtgtaacaaa
tgcggcgcatcctctcctgtgggttctggtgatcgtggtagtagtgggtataacagaggt
ggtggtgggggatatggtgctaatcgtggaggtagagatggaataagaggtggatatgat
agtgggaggagtaacaaccatggagacagaggtggaaattatgataataggagtggttcc
tatggaggaaatcaaagaggggaagatggtgggtatggtcatgttcctccttcggcaccc
agttcttatagtggcggtgctggtggaagttacccacctcctcctaatgcatatgatggg
aatacaaattatggaatgggttcagtgcctccacctacaagctatactggtggaccaaca
tcatacccttcatcttatggaggccctgcaggtggttatggtggtaagggtttgagtgat
gcaagaaccggtggtcgggttggaaatcctggtggatatgacagcggttatgggtctggt
ggtcctccacatcaggcaggtggttatggtggtccttctactgatgcaccaggtaagatc
aagcaatgtgatgacaactgcggggattcttgtgacaataggagaatctacatatcaaat
ttaccacctgattgtactattgaagaattaaaagacctttttggcggcattggacaagtt
ggaagaattaagcagaagcgtggatataaagatcagtggccatggaatataaaaatatac
actgatgagaaaggaaacccaaaaggtgatgcggttttgtcttatgaagatcctcaagct
gcacactctgctggcggtttctttaacaatcatgtcatgagaggctatacaatcagtgtg
gcaatggctgagaagactgcgcctaaagtacatgatcatggaggcggtagaggtggatat
ggtggtggtggggacaggcgcagggatggaggttctgggccagatagacatcactatggt
ggaaaccgttcacgtccatactaa
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