Hibiscus syriacus (Rose-of-Sharon): 120131378
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Entry
120131378 CDS
T09559
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120131378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120131378
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120131378
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120131378
NCBI-ProteinID:
XP_039004316
LinkDB
All DBs
Position
Unknown
AA seq
263 aa
AA seq
DB search
MAAKPGIAPTTYSPNLVQKTRPPIFKDNDLDWVRPDGRGFHQCRPAFFRTGAVNSASGSA
YAELGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFGTPVRGQGSDHKEFSSMLHK
ALEGAIMLETFPKTTVDVFALVLESGGSDIPVVISCASLALADAGIMMYDLVAAVSVACL
GKNLVIDPILEEESYQDGSLMLTCMPSRYEVTQLTFTGEWPTPDINEAMQLCLDACNKLG
KVMRTCLKEAASASQEEKLDVCF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaagcccggtatagctccgacaacgtattcgccgaatcttgtccagaaaacc
cgcccacccattttcaaagacaatgatctcgattgggtccgacctgatggccgcggtttc
caccagtgtcgaccagcatttttcaggacaggtgcagtaaactctgcttctggatctgct
tatgcagagcttgggaataccaaggtcattgtatctgtttttgggccaagagaaagtaag
aaagcaatgatgtacagtgatactgggaggttaaattgcaatgtcagctatacaacattt
ggcactccagttcgaggacagggatcagatcacaaagagttttcctcaatgcttcataaa
gctttggaaggtgcaataatgttggaaacatttcccaagaccaccgtggatgtctttgca
ttggtgttggaatctgggggcagtgatattcctgtggtgatatcgtgtgctagtcttgcc
cttgcagatgctgggatcatgatgtatgaccttgttgctgcagtttctgtggcctgtcta
gggaaaaaccttgtgattgatcctattcttgaagaggaaagctaccaagatggaagctta
atgcttacatgtatgccttctcgttatgaggttactcaactaacatttacgggagaatgg
ccaaccccagacattaatgaggcaatgcagctttgccttgatgcttgcaataagcttggt
aaagtgatgaggacatgtttgaaagaagcggcatctgcttcacaagaggagaaattagat
gtatgtttttaa
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