KEGG   Hibiscus syriacus (Rose-of-Sharon): 120131718
Entry
120131718         CDS       T09559                                 
Name
(RefSeq) UBP1-associated protein 2B-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120131718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120131718
   03041 Spliceosome [BR:hsyr03041]
    120131718
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120131718
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120131718
Spliceosome [BR:hsyr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    120131718
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 PHM7_cyt
Other DBs
NCBI-GeneID: 120131718
NCBI-ProteinID: XP_039004572
LinkDB
Position
Unknown
AA seq 507 aa
MAKKRKQRSSAVEPTKTTADPQPIEEEEEEEEEEEEEEQQHQEYIPEDPKLNVEEEELQE
VEEEVEEEAEEEVEEEEEVELDEDEEEDENEEDEDEEEAENQTLDGNGAPKGTSQEEELD
DEPFETLLQPFEKDQLITLIKKAVKKHPEFISSVRELADVDPSQRKIFVHGLSWDTTADT
LTAEFSKYGEIEECKAVTDRVSGKSKGYAFILFKHRSGARRALKQPQKKIGNRTTSCQLA
SQGPVPAPPPTAPPVSEYTQRKIFVSNVSAEMDPEKLLEFFKQFGEIEEGPLGLDKHTGK
PKGFALFVYRSVESARKALEEPHKNFEGHVLHCQKAIDGPKPTKGGYAGGASSGHHQPYQ
QHQQGQHQNQSRYHHAKKGKYSSSGSETGHLMAPSGPAALGVGFNPEVAAAGLNPGVAFT
APALNPVLGQALTALLASQGSGLGLGNLLGGFGGAPVNQGAPAAGYGGQVTGGYGNQMGV
QGGYQNPQMGQGGAGRNQPGGGAPYMG
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggctaagaagcgaaagcaacgatcttctgcggtcgaacccactaaaacaacagcggat
cctcaaccaatcgaagaagaagaagaagaagaagaagaagaagaagaagaagaacaacaa
catcaagaatacatacccgaagatccaaaacttaacgtagaagaggaagaactccaggaa
gttgaggaggaagttgaagaagaagcagaagaggaggttgaagaagaagaggaagtggag
ctggatgaagacgaggaggaagacgagaacgaagaggatgaagatgaagaagaagcggaa
aaccaaaccctagatggaaacggagctccgaaaggaacaagtcaagaagaggaattggac
gatgagcctttcgagacacttctacaaccgtttgagaaagatcaattgattacccttatc
aagaaagcagtcaaaaagcacccagagttcatatcgtcggttcgtgagcttgccgatgtg
gacccgtctcaacggaagatcttcgttcacggtctcagttgggataccactgctgacacc
ctcaccgccgagttttctaaatatggggaaatcgaagaatgcaaagcggttaccgatagg
gtttctgggaaatctaagggttatgcttttattctctttaaacatcggagtggagctcgc
cgagctttgaaacagccccagaagaagattgggaatagaactacttcttgtcagttggct
tcgcaagggccggttccagcacctcctccaactgcaccgcctgtgtctgagtatactcag
agaaagatttttgttagtaacgtttctgctgaaatggaccccgagaagttgcttgagttt
tttaaacagtttggggaaattgaggaaggtccgttggggcttgataagcatacagggaaa
ccgaaagggtttgctctttttgtatacaggtcggttgagagtgcaaggaaggccttagaa
gagccacacaagaattttgaaggccatgttttgcattgccagaaggccattgatgggcca
aaaccgactaaaggtggttatgcaggaggtgcttcttctgggcatcatcagccgtaccag
cagcaccagcaagggcaacatcagaatcagtctcgttaccatcatgctaagaaggggaag
tactcttctagtggatcagagaccggtcatttgatggctccatctgggcctgctgcattg
ggagtggggtttaaccctgaagttgctgctgctgggttgaaccctggggtggcttttact
gctccagctttaaacccagtgcttggacaggctttaactgcgttgcttgcttctcagggt
tctggtttggggctcggtaatctgcttggagggtttggtggtgcccctgtgaaccaggga
gcacctgctgcaggttatgggggtcaggttacaggaggctacgggaaccagatgggagta
cagggtgggtatcagaatccacagatggggcagggcggtgctggtaggaatcagcctggt
ggcggtgctccttacatgggatag

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