Hibiscus syriacus (Rose-of-Sharon): 120131991
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Entry
120131991 CDS
T09559
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120131991
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120131991
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120131991
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120131991
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120131991
microRNA pathway
RISC loading complex
120131991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
120131991
NCBI-ProteinID:
XP_039004777
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MDSSEQEGNGAAPESLPPPPPVPPDVVPIKAEPDAAKKKTVLQPMARRGTGSKGQKITII
TNHFKVNVGSTDGYFFHYSVSLYYEDGRPVEAKGVGRKVIDKVQETYSSELAGKNFAYDG
EKSLFTIGSLPNNKHEFTVVLEDAISKRNNGNASPGGNDSPNERERKRARRTYNSKTFKV
EISFAAKIPMHAIQSALRGQESENSQEALRVFDIILRQHASKQGCLLVRQSFFHDNQNNF
TDIGGGVLGCRGFHSSFRATQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPYSLDWT
KAKRVLKNLRIIVSPSNQEYKITGLSEQLCKDQMFSMKPKGVKNENGEAETVELTIYDYF
VNHRNIQLRYSADLPCINVGKPKRPTYIPIELCSLVSLQRYTKALNTLQRASLVEKSRQK
PQERMNVLSNVLRTSNYGAEPMLRSCGVSINSNFTQVEGRLLQPPKLRVGNGEDFIPRNG
RWNFNNKKLVEPTRIERWVVANFSARCDPHNIVQSLIRCGEMKGIKIDNPFDVFNEMNQN
RRLPPVARVEKMFDLIQSKLPGAPQFLLCLLPDRKNSDLYGPWKRKNLSEFGIVTQCMAP
TKVNDQYLTNLLLKINAKLGGLNSMLTIERSIPMVSKVPTIILGMDVSHGSPGQSDVPSI
AAVVSSRQWPLISRYRAAVRTQSPKLEMIDSLFKPSGKDDDGIMREALLDFYSSSGKRKP
DQIIIFRDGVSESQFNQVLNKELDQVIEACKFLDESWDPKFVVIVAQKNHHTKFFQQGSP
DNVQPGTVIDRSVCHPKNNDFYLCAHAGMIGTTRPTHYHILLDQVGFSADDLQELVHSLS
YVYQRSTTAISVVAPICYAHLAASQLGQFMKFEDASETSSSHGGVTAPGAIAVPQLPRLK
ENVSSSMFFC
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtcagagcaagaaggaaatggtgcggctccagaatctcttccccctccacca
cctgtgcctcctgatgtggttcctatcaaagcagaacctgatgctgcgaagaagaagaca
gtattacaacccatggccaggcgtggtactggatcgaaggggcaaaagataactattata
actaatcattttaaagtgaatgtgggcagtactgatggttacttcttccattacagtgtc
tctctttactatgaagatggtcgcccagtggaagctaagggtgttggaaggaaagtaatt
gacaaagtgcaggagacctacagcagtgagttggctgggaagaattttgcctatgatggt
gagaaaagcttattcactataggatcccttccgaataacaagcatgagttcaccgtcgta
cttgaggatgctatatcaaagagaaacaatgggaatgcaagcccgggaggtaatgacagc
ccaaatgagcgtgaaaggaagagagcaagacgcacttataattcgaagacgtttaaagtg
gagataagctttgctgccaagattcccatgcatgcaattcaaagtgcactgcgaggacag
gagtctgaaaactcacaagaagcactaagggtgtttgatataattctaaggcagcatgct
tctaaacagggttgccttcttgttcgccagtctttcttccatgacaatcagaataatttc
acagacattggaggtggtgtccttggctgtaggggttttcattcgagcttccgagccaca
caaggcggcctatcacttaatattgatgtgtcaactactatgataattcaaccaggtcca
gtagttgattttttaattgccaatcagaatgtcagagatccctactccctcgactggacc
aaggccaaaagagtgcttaagaatctcaggattatagttagtccatccaaccaggagtac
aagatcactggattgagcgagcaattatgcaaagatcagatgttttcaatgaagcccaaa
ggtgtgaagaatgaaaatggtgaagcagagacagtggagcttacaatatatgattacttt
gtcaaccatcgtaacatacaattgcgttattctgctgatttgccgtgcattaatgttggc
aagccaaagcgtcccacatatattcccattgagctttgctctttggtgtccttgcaacgc
tatacgaaagctttgaacaccttgcaaagagcttccctagttgaaaaatctaggcagaag
ccacaggaaaggatgaatgtgttgtcaaatgttttacgaacaagtaattatggtgctgaa
ccaatgttgcgatcatgtggggtttctataaattctaatttcactcaagttgaaggtcgt
cttctgcagcccccaaagttaagagtgggcaatggtgaagatttcattccgaggaatggc
cgttggaattttaacaataagaaattggtggagccaactaggattgaaagatgggttgtt
gctaacttttcagctcgttgtgatccacataacattgtgcaaagcctgatccggtgtgga
gaaatgaaaggaattaaaatagataatccatttgatgtatttaatgagatgaaccaaaat
agacgcctccctccggttgctagagttgagaaaatgtttgaccttatacaatctaaactg
cctggcgctccacagttccttctgtgtctgcttcctgatcggaagaactctgatctctat
ggtccatggaagcggaaaaatctttctgagtttggtatagtgactcagtgtatggcaccc
actaaagtgaacgatcaataccttacaaatttgcttctgaagataaatgccaagcttggt
ggattaaattcaatgttgaccattgagagatcaatacctatggtttcgaaggttccaact
atcatccttggcatggatgtgtcacatggctctcctgggcagtcggatgtcccgtcgatt
gctgcggtggttagctccagacagtggccactgatttcccgctatagggcagctgtgcgt
acacagtctccaaaacttgaaatgatagattctctcttcaaaccttctggcaaggatgat
gacggtattatgagggaagctcttttggatttctactcaagttcagggaagaggaagcct
gatcagataatcatattcagggatggggttagcgagtctcagttcaatcaggttttgaac
aaagaactggatcaagttatagaggcttgcaagttcctcgatgagagttgggacccaaag
tttgtggtgattgttgcacagaaaaatcatcatactaagtttttccagcagggatctccg
gacaatgtgcaacctggaactgtgatcgacagaagtgtctgccacccgaagaacaatgat
ttttatctctgtgctcatgctgggatgataggaaccacaaggccaacccattatcatatt
ctcctggatcaggttggcttttcagctgatgatctgcaggaacttgtccattctctatcc
tatgtgtatcaaaggagcaccactgccatctctgtcgttgctcctatttgctatgcccac
ttggctgcttcacagttgggacaattcatgaagtttgaggatgcttccgagacatcttcc
agtcatggcggtgttactgctcccggagccattgctgtccctcagcttcccagattgaaa
gaaaacgtcagcagctcaatgttcttctgttga
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