Hibiscus syriacus (Rose-of-Sharon): 120132167
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Entry
120132167 CDS
T09559
Name
(RefSeq) syndetin-like
KO
K23288
syndetin
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120132167
Membrane trafficking [BR:
hsyr04131
]
Protein recycling
Others
EARP complex
120132167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
120132167
NCBI-ProteinID:
XP_039004913
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MQQPNLFPFGSVLGNPFLLNGGVGDISKGGFESSRVFFLVPFLLSQGGGMDLSKVGEKLL
SSVRSARSLGLLPSASSSDRPDVPARAAAAAAVARALSGLPADQRYNLPSSSEELMSIYG
SKPQSQIVEEVEEEFYEEEFDPIKHILEHIPSEENELEYFEKQATLRLAQLDRVAEHLSR
NVMEHHEVMVKGMHLVRELEKDLKIANVICRNGRRHLNSSMNEVSRDLVVNTDSKKKQAL
MHLLPVLAELLHAWDMQVALESLVEEGNFCKAFQVLSEYLQLLDSLLELSAIQEMSRGVE
VWLGRTLQKLDSLLLGVCQEFKEEGYLTVVDSYALIGDVSGLAEKIQSFFMQEVISETHS
VLKSIVLHEDQDVHMQNSRLTYSDLCLQIPESKFRQCFLRTLAVLFKLMCSYHEIMAFHL
ENKVLECTITNAKLMEDQEPGSSSMKETTTATSLSDASEKKDSGSGDLVSEGKNDCGATS
SSGSPWYHLRKEAITFVSQNLQRGRKNLWQLMTSRVSVLLSASAAASTSIHQLLKNYEDL
NTFILAGEAFCGAEAFEFRQKLKGVCGNYFAAFHRQNVSALKMVLERETWLNLPPETAEI
ICFAGLVGDGAPLMAASGGRSSNSRVLHIDKSANKVDTDVKKSGFSPWLRNGNPFLLKVS
CSYKETHNSSPLNGATSAVFEGNADNIHGDVSSHNDDENHINGSNSISEEENEDLLADFI
DEDSQLPSRISKPILSRGYSFHGIDDFTAQTGSSLCALRSMDKYARLMQKLEIINIEFFK
GICQLFELFFHYIFETFGLQNMNSSAKTSTDSLTYRLKNALTRITQDCEEWIKTSSGSFS
SPTEHADLTPTAPQNTNFGSPASTSVGLKERCAGADTIALVARILHRSRTNLQSLLLKSN
TTVVEDFLCTWYVDAVPDLIEHIHRTTARILLHINGYVDRIANAKWELKELGMEHNGYVD
LLLGEFKHYKTRLAHGGIQKDVQDLLLDYGLEIVAETLIEGLSRVKRCTDEGRALMSLDL
QVLINGLQHFVPLNVKQKLQIVETFIKAYYLPETEYVHWARAHPEYSKTQIVGLINLVGT
MKGWKRKTRLEVLEKIE
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgaatctgttcccgttcggaagcgttttggggaatccgtttttattgaat
ggcggcgttggcgatataagcaaaggtggatttgagagctctagggttttcttcttggtt
ccttttttgctatcccaaggaggtggaatggatttgtccaaggttggggaaaaactcctc
agctccgtgcgttccgcgcgatcacttggtctcttgccttccgcttcctcttctgatcgg
cctgatgttccagctcgagctgcagcagctgctgctgttgctcgtgctctttcaggattg
ccagccgatcagagatataatcttccatcgagttctgaagaattgatgtcaatatatgga
agcaaacctcagagtcaaatagtagaagaagtagaggaagaattctatgaggaggagttt
gatccaataaaacacatcctggagcatatcccttctgaagaaaatgaactagaatatttt
gagaaacaggccacacttagattagctcaactggatagagtagcagaacatttatcccgc
aatgtcatggagcatcatgaagtaatggtgaagggtatgcatttggtcagggaattggag
aaagacttaaagattgcaaatgtcatatgtaggaatggcagaaggcatctaaactcatca
atgaatgaggtttcaagggaccttgttgtgaatactgattctaagaaaaaacaggctctt
atgcacttgcttccagtacttgctgagcttcttcatgcatgggacatgcaagtagctctc
gagtctcttgttgaggaaggtaatttctgcaaggcatttcaagtactatctgagtattta
caactactagatagtttattggagctctcagcaatacaagagatgagccgtggggttgag
gtttggctaggaaggactcttcaaaagctggattcgctcttgttaggagtttgtcaggag
tttaaagaagaaggctatttaactgtggttgactcttatgctttaataggagatgtctct
ggtcttgctgaaaagatacaaagttttttcatgcaagaagttatctcagaaactcactct
gtgttgaagagtattgttctgcatgaggaccaagatgtacatatgcaaaatagcagactt
acctacagtgatctatgccttcagatacctgaatctaagtttagacagtgtttcttaaga
acactggctgtcctgttcaaactaatgtgctcttatcatgaaatcatggcatttcatctg
gagaataaggttttagagtgcacaataacaaatgccaaattgatggaagaccaggaacca
ggttcatcttccatgaaggagactacaacagccacgtccttgtctgatgcatctgaaaag
aaagattctgggtctggtgatctggtttctgagggtaaaaatgattgtggtgctacgtca
agcagtggatctccgtggtatcatttaaggaaagaagccataactttcgtgtcacaaaac
cttcagaggggacgcaagaatctttggcaacttatgactagccgagtatcagtattgctt
tctgcttcagctgctgcttctacaagcattcatcaacttttgaaaaattatgaagatctt
aacactttcatcttggctggggaagctttctgtggagcggaggcttttgaattcaggcag
aaactgaagggtgtttgcggaaattattttgctgcatttcataggcaaaatgtatctgca
cttaaaatggttttggagagggaaacctggcttaatttgcctccagagactgccgaaata
atttgttttgctgggctggttggtgatggagcacccttaatggctgcatctggtggaaga
tcttctaattctagggtccttcacattgacaaatcagccaacaaagttgacacagatgtc
aagaagagcggtttttctccttggcttagaaacggaaacccatttttgctaaaagtaagc
tgcagttacaaagagactcacaattcctccccacttaatggagcaacctctgcagtattt
gagggaaatgctgataatattcatggtgatgtctcttcacacaatgacgatgagaatcat
atcaatggctccaattccatctcagaagaggaaaatgaggatttacttgctgactttatt
gatgaggatagtcagctccctagtcgaatttcaaaacccatcctttcaagaggttactct
tttcatggcattgatgattttacagcacaaaccggatcatctctttgtgctctaaggtcg
atggataagtatgcaagattgatgcagaaacttgaaataataaatattgagttttttaag
ggcatatgccaattatttgagttgtttttccattatatatttgaaacatttggtctgcaa
aacatgaattcaagtgcaaagacttcaactgactctcttacttatcggttaaagaatgcc
ttaacaagaataacacaagattgtgaagagtggataaaaacttcatcgggatccttctca
tctccaactgaacatgcagatttgacacccactgctcctcaaaatacaaattttggttct
ccggcaagcacctccgttggtctaaaggaaagatgtgcaggtgctgatactatagccctt
gtagctcggatattgcatagatctagaactaatctccaatccttgcttctgaagagtaat
acaactgtagttgaagattttttgtgcacctggtatgtggatgctgtgccagatcttata
gagcacatacacaggacaactgcaagaatactgctccacattaacgggtacgttgatcga
atagctaatgcgaaatgggaattgaaagagcttggcatggagcacaatgggtatgtggat
ctgctgttgggagaatttaagcactacaaaacaaggcttgctcatgggggaattcagaaa
gacgttcaagacctcctcttggactatggactcgaaattgttgcggaaactcttattgaa
ggtctatcccgagtgaagcgatgcactgatgaaggacgagctctcatgtcattagacctt
caggttttaatcaatggcctacaacacttcgtccccttgaacgtgaagcaaaagttacag
attgttgaaactttcatcaaggcttattatcttcctgaaaccgaatacgtacactgggca
cgagctcatcctgaatacagcaagactcagattgtggggttgataaaccttgttggtaca
atgaaaggttggaaaagaaaaaccaggttggaagttctggaaaagattgagtga
DBGET
integrated database retrieval system
